Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDKN2DP55273 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN2DP55273 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN2DP55273 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CDKN2DP55273 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN2DP55273 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN2DP55273 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDKN2DP55273 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDKN2DP55273 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKN2DP55273 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKN2DP55273 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 C1QBPP2-201ENST00000528754 825 ntBASIC18.88■□□□□ 0.61
CDKN2DP55273 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.88■□□□□ 0.61
CDKN2DP55273 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.88■□□□□ 0.61
CDKN2DP55273 AL031598.1-201ENST00000561511 1773 ntBASIC18.88■□□□□ 0.61
CDKN2DP55273 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDKN2DP55273 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDKN2DP55273 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDKN2DP55273 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDKN2DP55273 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKN2DP55273 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.87■□□□□ 0.61
CDKN2DP55273 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CDKN2DP55273 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKN2DP55273 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKN2DP55273 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.87■□□□□ 0.61
CDKN2DP55273 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKN2DP55273 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKN2DP55273 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKN2DP55273 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKN2DP55273 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.86■□□□□ 0.61
CDKN2DP55273 AL445675.2-201ENST00000620291 557 ntBASIC18.86■□□□□ 0.61
CDKN2DP55273 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.86■□□□□ 0.61
CDKN2DP55273 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKN2DP55273 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDKN2DP55273 AC093525.10-201ENST00000625130 1569 ntBASIC18.85■□□□□ 0.61
CDKN2DP55273 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN2DP55273 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 AL512353.2-201ENST00000448759 1962 ntBASIC18.85■□□□□ 0.61
CDKN2DP55273 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN2DP55273 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN2DP55273 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKN2DP55273 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDKN2DP55273 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN2DP55273 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2DP55273 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms