Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.78■□□□□ 0.76
PTPN7P35236 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.78■□□□□ 0.76
PTPN7P35236 AC233263.1-201ENST00000578059 224 ntBASIC19.78■□□□□ 0.76
PTPN7P35236 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPN7P35236 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTPN7P35236 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPN7P35236 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
PTPN7P35236 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTPN7P35236 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN7P35236 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
PTPN7P35236 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
PTPN7P35236 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN7P35236 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PTPN7P35236 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN7P35236 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN7P35236 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN7P35236 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.77■□□□□ 0.75
PTPN7P35236 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN7P35236 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
PTPN7P35236 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PTPN7P35236 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTPN7P35236 ID1-201ENST00000376105 1233 ntBASIC19.76■□□□□ 0.75
PTPN7P35236 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPN7P35236 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPN7P35236 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 RNA5SP413-201ENST00000516373 109 ntBASIC19.76■□□□□ 0.75
PTPN7P35236 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN7P35236 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PTPN7P35236 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN7P35236 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN7P35236 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPN7P35236 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PTPN7P35236 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN7P35236 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PTPN7P35236 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN7P35236 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN7P35236 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN7P35236 KRT16P5-201ENST00000455284 522 ntBASIC19.75■□□□□ 0.75
PTPN7P35236 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PTPN7P35236 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTPN7P35236 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTPN7P35236 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN7P35236 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN7P35236 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
PTPN7P35236 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN7P35236 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
PTPN7P35236 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN7P35236 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPN7P35236 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN7P35236 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN7P35236 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN7P35236 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN7P35236 Z85996.1-201ENST00000494644 937 ntBASIC19.74■□□□□ 0.75
PTPN7P35236 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN7P35236 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTPN7P35236 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms