Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NDST1-202ENST00000518299 769 ntTSL 216.59■□□□□ 0.252e-6■■■■□ 20.6
RPS3P23396 NDST1-208ENST00000524161 437 ntTSL 214.56□□□□□ -0.082e-6■■■■□ 20.6
RPS3P23396 NDST1-207ENST00000523767 3449 ntTSL 2 BASIC12.23□□□□□ -0.452e-6■■■■□ 20.6
RPS3P23396 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.622e-6■■■■□ 20.6
RPS3P23396 DHRS3-201ENST00000430996 826 ntTSL 318.44■□□□□ 0.541e-6■■■■□ 20.6
RPS3P23396 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.014e-7■■■■□ 20.6
RPS3P23396 PA2G4-206ENST00000552766 1085 ntTSL 5 BASIC11.37□□□□□ -0.594e-7■■■■□ 20.6
RPS3P23396 HLA-B-257ENST00000640094 147 ntBASIC8.08□□□□□ -1.121e-6■■■■□ 20.6
RPS3P23396 LRP10-202ENST00000470660 486 ntTSL 314.68□□□□□ -0.063e-8■■■■□ 20.6
RPS3P23396 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.539e-7■■■■□ 20.6
RPS3P23396 JUP-201ENST00000310706 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.639e-7■■■■□ 20.6
RPS3P23396 JUP-203ENST00000393931 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.719e-7■■■■□ 20.6
RPS3P23396 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.864e-7■■■■□ 20.6
RPS3P23396 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.614e-7■■■■□ 20.6
RPS3P23396 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.58■□□□□ 0.414e-7■■■■□ 20.6
RPS3P23396 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.55■□□□□ 0.46e-7■■■■□ 20.6
RPS3P23396 SCARB1-205ENST00000538291 5527 ntTSL 515.98■□□□□ 0.154e-7■■■■□ 20.6
RPS3P23396 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.46■□□□□ 0.074e-7■■■■□ 20.6
RPS3P23396 SCARB1-204ENST00000535005 1845 ntTSL 1 (best)12.11□□□□□ -0.474e-7■■■■□ 20.6
RPS3P23396 LAMB2-218ENST00000538659 576 ntTSL 211.35□□□□□ -0.592e-8■■■■□ 20.6
RPS3P23396 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.171e-9■■■■□ 20.6
RPS3P23396 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.61□□□□□ -1.191e-9■■■■□ 20.6
RPS3P23396 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.18□□□□□ -1.261e-9■■■■□ 20.6
RPS3P23396 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.7□□□□□ -1.341e-9■■■■□ 20.6
RPS3P23396 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.6□□□□□ -1.351e-9■■■■□ 20.6
RPS3P23396 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.12□□□□□ -1.591e-9■■■■□ 20.6
RPS3P23396 P3H1-203ENST00000372526 654 ntTSL 317.37■□□□□ 0.376e-7■■■■□ 20.6
RPS3P23396 TF-206ENST00000466911 526 ntTSL 415.49■□□□□ 0.071e-26■■■■□ 20.6
RPS3P23396 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.159e-10■■■■□ 20.6
RPS3P23396 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.329e-10■■■■□ 20.6
RPS3P23396 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.183e-7■■■■□ 20.6
RPS3P23396 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.063e-7■■■■□ 20.6
RPS3P23396 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.511e-6■■■■□ 20.6
RPS3P23396 MCM5-203ENST00000416905 739 ntTSL 313.58□□□□□ -0.249e-7■■■■□ 20.6
RPS3P23396 PKM-209ENST00000563986 825 ntTSL 211.63□□□□□ -0.553e-34■■■■□ 20.6
RPS3P23396 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.789e-7■■■■□ 20.6
RPS3P23396 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.199e-7■■■■□ 20.6
RPS3P23396 SERPINA3-209ENST00000621603 639 nt7.76□□□□□ -1.172e-20■■■■□ 20.6
RPS3P23396 MOGS-204ENST00000448666 1616 ntTSL 1 (best)18.85■□□□□ 0.614e-8■■■■□ 20.6
RPS3P23396 POR-202ENST00000412064 1044 ntTSL 513.2□□□□□ -0.34e-14■■■■□ 20.6
RPS3P23396 GRHPR-207ENST00000491488 602 ntTSL 518.91■□□□□ 0.622e-6■■■■□ 20.6
RPS3P23396 GRHPR-202ENST00000377824 1844 ntTSL 217.44■□□□□ 0.382e-6■■■■□ 20.6
RPS3P23396 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.262e-6■■■■□ 20.6
RPS3P23396 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.21■□□□□ 0.192e-6■■■■□ 20.6
RPS3P23396 GRHPR-203ENST00000460882 1080 ntTSL 1 (best)15.84■□□□□ 0.132e-6■■■■□ 20.6
RPS3P23396 GRHPR-208ENST00000493368 1136 ntTSL 1 (best)14.91□□□□□ -0.022e-6■■■■□ 20.6
RPS3P23396 GRHPR-206ENST00000487399 952 ntTSL 213.65□□□□□ -0.226e-7■■■■□ 20.6
RPS3P23396 ECH1-203ENST00000594391 919 ntTSL 516.36■□□□□ 0.217e-8■■■■□ 20.6
RPS3P23396 NFE2L1-221ENST00000585062 556 ntTSL 415.49■□□□□ 0.072e-7■■■■□ 20.6
RPS3P23396 HLA-C-202ENST00000376237 1538 nt22.69■■□□□ 1.223e-7■■■■□ 20.6
RPS3P23396 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.983e-7■■■■□ 20.6
RPS3P23396 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.96■□□□□ 0.953e-7■■■■□ 20.6
RPS3P23396 ILVBL-207ENST00000533148 1309 ntTSL 516.94■□□□□ 0.35e-7■■■■□ 20.5
RPS3P23396 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC11.07□□□□□ -0.644e-21■■■■□ 20.5
RPS3P23396 PPP4C-206ENST00000563597 815 ntTSL 324■■□□□ 1.437e-7■■■■□ 20.5
RPS3P23396 PPP4C-210ENST00000567040 879 ntTSL 216.75■□□□□ 0.277e-7■■■■□ 20.5
RPS3P23396 TF-213ENST00000494430 594 ntTSL 418.46■□□□□ 0.558e-27■■■■□ 20.5
RPS3P23396 TKFC-216ENST00000532173 805 ntTSL 216.99■□□□□ 0.312e-8■■■■□ 20.5
RPS3P23396 VCL-205ENST00000478896 727 ntTSL 512.64□□□□□ -0.395e-7■■■■□ 20.5
RPS3P23396 TNFRSF12A-207ENST00000575836 161 ntTSL 315.09■□□□□ 0.011e-18■■■■□ 20.5
RPS3P23396 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.58e-7■■■■□ 20.5
RPS3P23396 ILVBL-212ENST00000598709 747 ntTSL 514.53□□□□□ -0.084e-7■■■■□ 20.5
RPS3P23396 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.096e-11■■■■□ 20.5
RPS3P23396 SSR2-207ENST00000473699 1027 ntTSL 315.13■□□□□ 0.016e-11■■■■□ 20.5
RPS3P23396 SSR2-211ENST00000484320 1148 ntTSL 514.67□□□□□ -0.066e-11■■■■□ 20.5
RPS3P23396 SSR2-209ENST00000480176 1040 ntTSL 213.1□□□□□ -0.316e-11■■■■□ 20.5
RPS3P23396 SSR2-218ENST00000532074 1008 ntTSL 510.24□□□□□ -0.776e-11■■■■□ 20.5
RPS3P23396 SSR2-213ENST00000496742 825 ntTSL 3 BASIC9.59□□□□□ -0.876e-11■■■■□ 20.5
RPS3P23396 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.986e-11■■■■□ 20.5
RPS3P23396 SSR2-212ENST00000488179 1712 ntTSL 58.03□□□□□ -1.126e-11■■■■□ 20.5
RPS3P23396 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.8□□□□□ -1.166e-11■■■■□ 20.5
RPS3P23396 SSR2-216ENST00000531790 476 ntTSL 57.12□□□□□ -1.276e-11■■■■□ 20.5
RPS3P23396 WBP2-205ENST00000586257 676 ntTSL 316.02■□□□□ 0.162e-8■■■■□ 20.5
RPS3P23396 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.025e-14■■■■□ 20.5
RPS3P23396 ETFB-205ENST00000596253 575 ntTSL 314.62□□□□□ -0.075e-14■■■■□ 20.5
RPS3P23396 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC9.81□□□□□ -0.848e-17■■■■□ 20.5
RPS3P23396 DECR1-209ENST00000519410 705 ntTSL 515.35■□□□□ 0.054e-6■■■■□ 20.5
RPS3P23396 DECR1-203ENST00000517314 654 ntTSL 514.05□□□□□ -0.164e-6■■■■□ 20.5
RPS3P23396 DECR1-213ENST00000521603 578 ntTSL 29.42□□□□□ -0.94e-6■■■■□ 20.5
RPS3P23396 DECR1-211ENST00000520227 864 ntTSL 55.23□□□□□ -1.574e-6■■■■□ 20.5
RPS3P23396 DECR1-205ENST00000517761 774 ntTSL 33.54□□□□□ -1.844e-6■■■■□ 20.5
RPS3P23396 DECR1-207ENST00000519007 762 ntTSL 31.61□□□□□ -2.154e-6■■■■□ 20.5
RPS3P23396 DECR1-206ENST00000518725 527 ntTSL 51.61□□□□□ -2.154e-6■■■■□ 20.5
RPS3P23396 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.163e-7■■■■□ 20.5
RPS3P23396 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.113e-7■■■■□ 20.5
RPS3P23396 TMED10-203ENST00000555085 553 ntTSL 212.92□□□□□ -0.346e-11■■■■□ 20.5
RPS3P23396 TMED10-204ENST00000555873 1161 ntTSL 1 (best)12.92□□□□□ -0.346e-11■■■■□ 20.5
RPS3P23396 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.346e-11■■■■□ 20.5
RPS3P23396 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.22□□□□□ -0.292e-6■■■■□ 20.5
RPS3P23396 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC10.65□□□□□ -0.72e-6■■■■□ 20.5
RPS3P23396 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.732e-6■■■■□ 20.5
RPS3P23396 C12orf57-207ENST00000545581 556 ntTSL 39.04□□□□□ -0.962e-6■■■■□ 20.5
RPS3P23396 C12orf57-205ENST00000542222 640 ntTSL 28.86□□□□□ -0.992e-6■■■■□ 20.5
RPS3P23396 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.85□□□□□ -0.034e-42■■■■□ 20.5
RPS3P23396 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.394e-42■■■■□ 20.5
RPS3P23396 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.017e-17■■■■□ 20.5
RPS3P23396 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.84□□□□□ -0.197e-17■■■■□ 20.5
RPS3P23396 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC11.17□□□□□ -0.621e-8■■■■□ 20.5
RPS3P23396 PDLIM5-223ENST00000627587 1853 ntTSL 29.37□□□□□ -0.911e-8■■■■□ 20.5
RPS3P23396 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC9.17□□□□□ -0.941e-8■■■■□ 20.5
Retrieved 100 of 24,271 protein–RNA pairs in 492.4 ms