Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 AC106820.2-201ENST00000563775 3264 ntBASIC17.44■□□□□ 0.38
HTR1AP08908 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.44■□□□□ 0.38
HTR1AP08908 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.44■□□□□ 0.38
HTR1AP08908 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HTR1AP08908 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.44■□□□□ 0.38
HTR1AP08908 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HTR1AP08908 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HTR1AP08908 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HTR1AP08908 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.44■□□□□ 0.38
HTR1AP08908 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.43■□□□□ 0.38
HTR1AP08908 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1AP08908 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
HTR1AP08908 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HTR1AP08908 MIR638-201ENST00000385237 100 ntBASIC17.43■□□□□ 0.38
HTR1AP08908 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1AP08908 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1AP08908 AL162412.1-201ENST00000567129 965 ntBASIC17.43■□□□□ 0.38
HTR1AP08908 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.43■□□□□ 0.38
HTR1AP08908 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.43■□□□□ 0.38
HTR1AP08908 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HTR1AP08908 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.43■□□□□ 0.38
HTR1AP08908 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HTR1AP08908 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1AP08908 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1AP08908 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1AP08908 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HTR1AP08908 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1AP08908 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1AP08908 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1AP08908 KRT18P61-201ENST00000585825 1298 ntBASIC17.42■□□□□ 0.38
HTR1AP08908 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HTR1AP08908 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HTR1AP08908 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HTR1AP08908 LINC00896-202ENST00000609602 2128 ntBASIC17.42■□□□□ 0.38
HTR1AP08908 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1AP08908 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1AP08908 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR1AP08908 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.41■□□□□ 0.38
HTR1AP08908 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1AP08908 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1AP08908 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR1AP08908 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1AP08908 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1AP08908 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1AP08908 AC016405.3-201ENST00000607710 860 ntBASIC17.41■□□□□ 0.38
HTR1AP08908 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1AP08908 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms