Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.36■■□□□ 1.01
VSIG4Q9Y279 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.36■■□□□ 1.01
VSIG4Q9Y279 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VSIG4Q9Y279 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VSIG4Q9Y279 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VSIG4Q9Y279 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.34■■□□□ 1.01
VSIG4Q9Y279 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.34■■□□□ 1.01
VSIG4Q9Y279 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VSIG4Q9Y279 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VSIG4Q9Y279 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
VSIG4Q9Y279 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.33■■□□□ 1.01
VSIG4Q9Y279 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
VSIG4Q9Y279 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VSIG4Q9Y279 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VSIG4Q9Y279 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VSIG4Q9Y279 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VSIG4Q9Y279 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VSIG4Q9Y279 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VSIG4Q9Y279 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.32■■□□□ 1
VSIG4Q9Y279 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
VSIG4Q9Y279 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.32■■□□□ 1
VSIG4Q9Y279 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
VSIG4Q9Y279 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VSIG4Q9Y279 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.32■■□□□ 1
VSIG4Q9Y279 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
VSIG4Q9Y279 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.31■■□□□ 1
VSIG4Q9Y279 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VSIG4Q9Y279 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VSIG4Q9Y279 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VSIG4Q9Y279 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.29■■□□□ 1
VSIG4Q9Y279 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.29■■□□□ 1
VSIG4Q9Y279 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.28■■□□□ 1
VSIG4Q9Y279 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VSIG4Q9Y279 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VSIG4Q9Y279 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.27■■□□□ 1
VSIG4Q9Y279 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VSIG4Q9Y279 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.27■■□□□ 1
VSIG4Q9Y279 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.27■■□□□ 1
VSIG4Q9Y279 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VSIG4Q9Y279 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
VSIG4Q9Y279 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.27■□□□□ 0.99
VSIG4Q9Y279 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VSIG4Q9Y279 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VSIG4Q9Y279 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VSIG4Q9Y279 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
VSIG4Q9Y279 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.25■□□□□ 0.99
VSIG4Q9Y279 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VSIG4Q9Y279 AC020928.2-201ENST00000588717 2197 ntBASIC21.24■□□□□ 0.99
VSIG4Q9Y279 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
VSIG4Q9Y279 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
VSIG4Q9Y279 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
VSIG4Q9Y279 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.24■□□□□ 0.99
VSIG4Q9Y279 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
VSIG4Q9Y279 CAHM-201ENST00000604200 896 ntBASIC21.23■□□□□ 0.99
VSIG4Q9Y279 AL391121.1-201ENST00000607967 1349 ntBASIC21.23■□□□□ 0.99
VSIG4Q9Y279 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
VSIG4Q9Y279 AC127502.1-201ENST00000399971 1502 ntBASIC21.22■□□□□ 0.99
VSIG4Q9Y279 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VSIG4Q9Y279 AC100797.4-201ENST00000631653 1827 ntBASIC21.22■□□□□ 0.99
VSIG4Q9Y279 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VSIG4Q9Y279 SUZ12P1-203ENST00000578195 985 ntBASIC21.21■□□□□ 0.99
VSIG4Q9Y279 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VSIG4Q9Y279 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VSIG4Q9Y279 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VSIG4Q9Y279 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.2■□□□□ 0.98
VSIG4Q9Y279 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VSIG4Q9Y279 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.19■□□□□ 0.98
VSIG4Q9Y279 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSIG4Q9Y279 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VSIG4Q9Y279 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
VSIG4Q9Y279 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VSIG4Q9Y279 AC145676.1-201ENST00000514988 2004 ntBASIC21.18■□□□□ 0.98
VSIG4Q9Y279 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VSIG4Q9Y279 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VSIG4Q9Y279 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VSIG4Q9Y279 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VSIG4Q9Y279 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VSIG4Q9Y279 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VSIG4Q9Y279 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VSIG4Q9Y279 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VSIG4Q9Y279 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VSIG4Q9Y279 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VSIG4Q9Y279 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms