Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDHGB4Q9UN71 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PCDHGB4Q9UN71 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGB4Q9UN71 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGB4Q9UN71 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGB4Q9UN71 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHGB4Q9UN71 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGB4Q9UN71 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHGB4Q9UN71 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB4Q9UN71 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHGB4Q9UN71 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHGB4Q9UN71 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB4Q9UN71 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGB4Q9UN71 AC005559.1-201ENST00000589661 871 ntBASIC24.28■■□□□ 1.48
PCDHGB4Q9UN71 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGB4Q9UN71 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGB4Q9UN71 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 AL449106.1-201ENST00000608517 1980 ntBASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGB4Q9UN71 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGB4Q9UN71 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGB4Q9UN71 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGB4Q9UN71 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.25■■□□□ 1.47
PCDHGB4Q9UN71 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB4Q9UN71 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB4Q9UN71 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB4Q9UN71 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHGB4Q9UN71 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGB4Q9UN71 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB4Q9UN71 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PCDHGB4Q9UN71 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB4Q9UN71 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB4Q9UN71 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
PCDHGB4Q9UN71 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGB4Q9UN71 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGB4Q9UN71 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHGB4Q9UN71 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGB4Q9UN71 SUZ12P1-203ENST00000578195 985 ntBASIC24.22■■□□□ 1.47
PCDHGB4Q9UN71 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGB4Q9UN71 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGB4Q9UN71 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHGB4Q9UN71 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGB4Q9UN71 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGB4Q9UN71 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.2■■□□□ 1.47
PCDHGB4Q9UN71 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
PCDHGB4Q9UN71 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHGB4Q9UN71 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
PCDHGB4Q9UN71 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHGB4Q9UN71 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGB4Q9UN71 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGB4Q9UN71 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGB4Q9UN71 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 AC108673.1-201ENST00000510422 1159 ntBASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGB4Q9UN71 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGB4Q9UN71 BX255925.1-201ENST00000566954 1854 ntBASIC24.16■■□□□ 1.46
PCDHGB4Q9UN71 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB4Q9UN71 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB4Q9UN71 AC100797.4-201ENST00000631653 1827 ntBASIC24.16■■□□□ 1.46
PCDHGB4Q9UN71 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGB4Q9UN71 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHGB4Q9UN71 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB4Q9UN71 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB4Q9UN71 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGB4Q9UN71 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHGB4Q9UN71 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDHGB4Q9UN71 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDHGB4Q9UN71 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGB4Q9UN71 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.13■■□□□ 1.45
PCDHGB4Q9UN71 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms