Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SDF2L1Q9HCN8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SDF2L1Q9HCN8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.77■□□□□ 0.76
SDF2L1Q9HCN8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SDF2L1Q9HCN8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SDF2L1Q9HCN8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SDF2L1Q9HCN8 AC145676.1-201ENST00000514988 2004 ntBASIC19.76■□□□□ 0.75
SDF2L1Q9HCN8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SDF2L1Q9HCN8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SDF2L1Q9HCN8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.75■□□□□ 0.75
SDF2L1Q9HCN8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.75■□□□□ 0.75
SDF2L1Q9HCN8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2L1Q9HCN8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2L1Q9HCN8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.75■□□□□ 0.75
SDF2L1Q9HCN8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SDF2L1Q9HCN8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.74■□□□□ 0.75
SDF2L1Q9HCN8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SDF2L1Q9HCN8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2L1Q9HCN8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2L1Q9HCN8 AP002365.1-201ENST00000603448 772 ntBASIC19.73■□□□□ 0.75
SDF2L1Q9HCN8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SDF2L1Q9HCN8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2L1Q9HCN8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2L1Q9HCN8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SDF2L1Q9HCN8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SDF2L1Q9HCN8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2L1Q9HCN8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SDF2L1Q9HCN8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
SDF2L1Q9HCN8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SDF2L1Q9HCN8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SDF2L1Q9HCN8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SDF2L1Q9HCN8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.7■□□□□ 0.74
SDF2L1Q9HCN8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SDF2L1Q9HCN8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDF2L1Q9HCN8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2L1Q9HCN8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2L1Q9HCN8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SDF2L1Q9HCN8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.68■□□□□ 0.74
SDF2L1Q9HCN8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDF2L1Q9HCN8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDF2L1Q9HCN8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.66■□□□□ 0.74
SDF2L1Q9HCN8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2L1Q9HCN8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2L1Q9HCN8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.66■□□□□ 0.74
SDF2L1Q9HCN8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDF2L1Q9HCN8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SDF2L1Q9HCN8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.64■□□□□ 0.74
SDF2L1Q9HCN8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SDF2L1Q9HCN8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2L1Q9HCN8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2L1Q9HCN8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDF2L1Q9HCN8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2L1Q9HCN8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.62■□□□□ 0.73
SDF2L1Q9HCN8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2L1Q9HCN8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2L1Q9HCN8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.6■□□□□ 0.73
SDF2L1Q9HCN8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2L1Q9HCN8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2L1Q9HCN8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2L1Q9HCN8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2L1Q9HCN8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2L1Q9HCN8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.59■□□□□ 0.73
SDF2L1Q9HCN8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.59■□□□□ 0.73
SDF2L1Q9HCN8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2L1Q9HCN8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDF2L1Q9HCN8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDF2L1Q9HCN8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDF2L1Q9HCN8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SDF2L1Q9HCN8 AP004833.2-201ENST00000532228 1454 ntBASIC19.58■□□□□ 0.72
SDF2L1Q9HCN8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SDF2L1Q9HCN8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2L1Q9HCN8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms