Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 AL391121.1-201ENST00000607967 1349 ntBASIC25.86■■□□□ 1.73
CDC42EP4Q9H3Q1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CDC42EP4Q9H3Q1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.85■■□□□ 1.73
CDC42EP4Q9H3Q1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.84■■□□□ 1.73
CDC42EP4Q9H3Q1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.84■■□□□ 1.73
CDC42EP4Q9H3Q1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42EP4Q9H3Q1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CDC42EP4Q9H3Q1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.83■■□□□ 1.73
CDC42EP4Q9H3Q1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42EP4Q9H3Q1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42EP4Q9H3Q1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42EP4Q9H3Q1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
CDC42EP4Q9H3Q1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42EP4Q9H3Q1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42EP4Q9H3Q1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42EP4Q9H3Q1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42EP4Q9H3Q1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42EP4Q9H3Q1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42EP4Q9H3Q1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.81■■□□□ 1.72
CDC42EP4Q9H3Q1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42EP4Q9H3Q1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42EP4Q9H3Q1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42EP4Q9H3Q1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42EP4Q9H3Q1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.79■■□□□ 1.72
CDC42EP4Q9H3Q1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42EP4Q9H3Q1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CDC42EP4Q9H3Q1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42EP4Q9H3Q1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42EP4Q9H3Q1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.78■■□□□ 1.72
CDC42EP4Q9H3Q1 AC091060.1-201ENST00000623524 1766 ntBASIC25.77■■□□□ 1.72
CDC42EP4Q9H3Q1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42EP4Q9H3Q1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CDC42EP4Q9H3Q1 CAHM-201ENST00000604200 896 ntBASIC25.77■■□□□ 1.72
CDC42EP4Q9H3Q1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CDC42EP4Q9H3Q1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.77■■□□□ 1.72
CDC42EP4Q9H3Q1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42EP4Q9H3Q1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42EP4Q9H3Q1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42EP4Q9H3Q1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42EP4Q9H3Q1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CDC42EP4Q9H3Q1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.74■■□□□ 1.71
CDC42EP4Q9H3Q1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42EP4Q9H3Q1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CDC42EP4Q9H3Q1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
CDC42EP4Q9H3Q1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42EP4Q9H3Q1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42EP4Q9H3Q1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDC42EP4Q9H3Q1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CDC42EP4Q9H3Q1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.73■■□□□ 1.71
CDC42EP4Q9H3Q1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDC42EP4Q9H3Q1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 AC018358.1-201ENST00000631079 1402 ntBASIC25.71■■□□□ 1.71
CDC42EP4Q9H3Q1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.7■■□□□ 1.71
CDC42EP4Q9H3Q1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42EP4Q9H3Q1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDC42EP4Q9H3Q1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42EP4Q9H3Q1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
CDC42EP4Q9H3Q1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDC42EP4Q9H3Q1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42EP4Q9H3Q1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.68■■□□□ 1.7
CDC42EP4Q9H3Q1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
CDC42EP4Q9H3Q1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDC42EP4Q9H3Q1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.68■■□□□ 1.7
CDC42EP4Q9H3Q1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42EP4Q9H3Q1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42EP4Q9H3Q1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42EP4Q9H3Q1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42EP4Q9H3Q1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42EP4Q9H3Q1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42EP4Q9H3Q1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42EP4Q9H3Q1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42EP4Q9H3Q1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42EP4Q9H3Q1 AC136428.2-201ENST00000563187 214 ntBASIC25.65■■□□□ 1.7
CDC42EP4Q9H3Q1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.65■■□□□ 1.7
CDC42EP4Q9H3Q1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42EP4Q9H3Q1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42EP4Q9H3Q1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CDC42EP4Q9H3Q1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CDC42EP4Q9H3Q1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
CDC42EP4Q9H3Q1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.64■■□□□ 1.69
CDC42EP4Q9H3Q1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms