Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX47Q9H0S4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX47Q9H0S4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX47Q9H0S4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX47Q9H0S4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
DDX47Q9H0S4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX47Q9H0S4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.43■■□□□ 1.82
DDX47Q9H0S4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX47Q9H0S4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX47Q9H0S4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
DDX47Q9H0S4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX47Q9H0S4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.42■■□□□ 1.82
DDX47Q9H0S4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.42■■□□□ 1.82
DDX47Q9H0S4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX47Q9H0S4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
DDX47Q9H0S4 AP002414.2-202ENST00000590929 1450 ntBASIC26.41■■□□□ 1.82
DDX47Q9H0S4 AL449106.1-201ENST00000608517 1980 ntBASIC26.4■■□□□ 1.82
DDX47Q9H0S4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX47Q9H0S4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
DDX47Q9H0S4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
DDX47Q9H0S4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
DDX47Q9H0S4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
DDX47Q9H0S4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX47Q9H0S4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.37■■□□□ 1.81
DDX47Q9H0S4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
DDX47Q9H0S4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX47Q9H0S4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
DDX47Q9H0S4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX47Q9H0S4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
DDX47Q9H0S4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX47Q9H0S4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX47Q9H0S4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.35■■□□□ 1.81
DDX47Q9H0S4 AC136428.2-201ENST00000563187 214 ntBASIC26.35■■□□□ 1.81
DDX47Q9H0S4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
DDX47Q9H0S4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.35■■□□□ 1.81
DDX47Q9H0S4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.34■■□□□ 1.81
DDX47Q9H0S4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX47Q9H0S4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX47Q9H0S4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX47Q9H0S4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX47Q9H0S4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
DDX47Q9H0S4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX47Q9H0S4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
DDX47Q9H0S4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
DDX47Q9H0S4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
DDX47Q9H0S4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
DDX47Q9H0S4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX47Q9H0S4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX47Q9H0S4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX47Q9H0S4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX47Q9H0S4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX47Q9H0S4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX47Q9H0S4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
DDX47Q9H0S4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX47Q9H0S4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX47Q9H0S4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX47Q9H0S4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX47Q9H0S4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX47Q9H0S4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX47Q9H0S4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX47Q9H0S4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
DDX47Q9H0S4 AC097358.2-201ENST00000607541 1159 ntBASIC26.26■■□□□ 1.79
DDX47Q9H0S4 AC091060.1-201ENST00000623524 1766 ntBASIC26.25■■□□□ 1.79
DDX47Q9H0S4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
DDX47Q9H0S4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.25■■□□□ 1.79
DDX47Q9H0S4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.25■■□□□ 1.79
DDX47Q9H0S4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
DDX47Q9H0S4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
DDX47Q9H0S4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
DDX47Q9H0S4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX47Q9H0S4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX47Q9H0S4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX47Q9H0S4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
DDX47Q9H0S4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX47Q9H0S4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX47Q9H0S4 AC018358.1-201ENST00000631079 1402 ntBASIC26.22■■□□□ 1.79
DDX47Q9H0S4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX47Q9H0S4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX47Q9H0S4 MIR762-201ENST00000390236 83 ntBASIC26.21■■□□□ 1.79
DDX47Q9H0S4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX47Q9H0S4 AC135983.2-203ENST00000454486 1613 ntBASIC26.21■■□□□ 1.79
DDX47Q9H0S4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
DDX47Q9H0S4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
DDX47Q9H0S4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
DDX47Q9H0S4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
DDX47Q9H0S4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
DDX47Q9H0S4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX47Q9H0S4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.18■■□□□ 1.78
DDX47Q9H0S4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX47Q9H0S4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX47Q9H0S4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX47Q9H0S4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX47Q9H0S4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms