Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.32■■□□□ 1.8
LRFN3Q9BTN0 AC148477.6-201ENST00000623746 465 ntBASIC26.32■■□□□ 1.8
LRFN3Q9BTN0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.32■■□□□ 1.8
LRFN3Q9BTN0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
LRFN3Q9BTN0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.31■■□□□ 1.8
LRFN3Q9BTN0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.31■■□□□ 1.8
LRFN3Q9BTN0 AC133552.2-201ENST00000619106 1032 ntBASIC26.3■■□□□ 1.8
LRFN3Q9BTN0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LRFN3Q9BTN0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.29■■□□□ 1.8
LRFN3Q9BTN0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LRFN3Q9BTN0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
LRFN3Q9BTN0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.28■■□□□ 1.8
LRFN3Q9BTN0 YBX1P4-201ENST00000392794 808 ntBASIC26.27■■□□□ 1.8
LRFN3Q9BTN0 AC074183.2-201ENST00000623112 922 ntBASIC26.27■■□□□ 1.8
LRFN3Q9BTN0 AC009831.1-201ENST00000580420 1582 ntBASIC26.27■■□□□ 1.8
LRFN3Q9BTN0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
LRFN3Q9BTN0 MIR638-201ENST00000385237 100 ntBASIC26.26■■□□□ 1.79
LRFN3Q9BTN0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.26■■□□□ 1.79
LRFN3Q9BTN0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.25■■□□□ 1.79
LRFN3Q9BTN0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
LRFN3Q9BTN0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRFN3Q9BTN0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.25■■□□□ 1.79
LRFN3Q9BTN0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
LRFN3Q9BTN0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
LRFN3Q9BTN0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRFN3Q9BTN0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
LRFN3Q9BTN0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRFN3Q9BTN0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRFN3Q9BTN0 AC103834.1-201ENST00000520383 144 ntBASIC26.23■■□□□ 1.79
LRFN3Q9BTN0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.22■■□□□ 1.79
LRFN3Q9BTN0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.21■■□□□ 1.79
LRFN3Q9BTN0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.21■■□□□ 1.79
LRFN3Q9BTN0 AC007029.1-201ENST00000604183 313 ntBASIC26.21■■□□□ 1.79
LRFN3Q9BTN0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRFN3Q9BTN0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.2■■□□□ 1.78
LRFN3Q9BTN0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LRFN3Q9BTN0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRFN3Q9BTN0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
LRFN3Q9BTN0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRFN3Q9BTN0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.19■■□□□ 1.78
LRFN3Q9BTN0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
LRFN3Q9BTN0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.18■■□□□ 1.78
LRFN3Q9BTN0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.17■■□□□ 1.78
LRFN3Q9BTN0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LRFN3Q9BTN0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.16■■□□□ 1.78
LRFN3Q9BTN0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.16■■□□□ 1.78
LRFN3Q9BTN0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.16■■□□□ 1.78
LRFN3Q9BTN0 AC092666.2-201ENST00000613287 246 ntBASIC26.15■■□□□ 1.78
LRFN3Q9BTN0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LRFN3Q9BTN0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.14■■□□□ 1.78
LRFN3Q9BTN0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LRFN3Q9BTN0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LRFN3Q9BTN0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LRFN3Q9BTN0 MIR219A2-201ENST00000608502 1504 ntBASIC26.14■■□□□ 1.77
LRFN3Q9BTN0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 DUX4L9-201ENST00000449051 1259 ntBASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.13■■□□□ 1.77
LRFN3Q9BTN0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.12■■□□□ 1.77
LRFN3Q9BTN0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
LRFN3Q9BTN0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.12■■□□□ 1.77
LRFN3Q9BTN0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRFN3Q9BTN0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRFN3Q9BTN0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
LRFN3Q9BTN0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.11■■□□□ 1.77
LRFN3Q9BTN0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.11■■□□□ 1.77
LRFN3Q9BTN0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LRFN3Q9BTN0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
LRFN3Q9BTN0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
LRFN3Q9BTN0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.1■■□□□ 1.77
LRFN3Q9BTN0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
LRFN3Q9BTN0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LRFN3Q9BTN0 SPCS2P3-201ENST00000500401 656 ntBASIC26.09■■□□□ 1.77
LRFN3Q9BTN0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.09■■□□□ 1.77
LRFN3Q9BTN0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.09■■□□□ 1.77
LRFN3Q9BTN0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
LRFN3Q9BTN0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.08■■□□□ 1.77
LRFN3Q9BTN0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.08■■□□□ 1.77
LRFN3Q9BTN0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.08■■□□□ 1.77
LRFN3Q9BTN0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 AL157400.5-201ENST00000507624 621 ntBASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 AC126177.7-201ENST00000547904 679 ntBASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LRFN3Q9BTN0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRFN3Q9BTN0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LRFN3Q9BTN0 AC139795.1-202ENST00000500444 432 ntBASIC26.06■■□□□ 1.76
LRFN3Q9BTN0 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.06■■□□□ 1.76
LRFN3Q9BTN0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
LRFN3Q9BTN0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LRFN3Q9BTN0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.05■■□□□ 1.76
LRFN3Q9BTN0 PVT1_1.1-201ENST00000615125 194 ntBASIC26.04■■□□□ 1.76
LRFN3Q9BTN0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
LRFN3Q9BTN0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.03■■□□□ 1.76
LRFN3Q9BTN0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms