Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NEK1Q96PY6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NEK1Q96PY6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NEK1Q96PY6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
NEK1Q96PY6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NEK1Q96PY6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NEK1Q96PY6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.15■■■□□ 2.42
NEK1Q96PY6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.15■■■□□ 2.42
NEK1Q96PY6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
NEK1Q96PY6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
NEK1Q96PY6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NEK1Q96PY6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NEK1Q96PY6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.13■■■□□ 2.41
NEK1Q96PY6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.13■■■□□ 2.41
NEK1Q96PY6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
NEK1Q96PY6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NEK1Q96PY6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NEK1Q96PY6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
NEK1Q96PY6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.12■■■□□ 2.41
NEK1Q96PY6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
NEK1Q96PY6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.11■■■□□ 2.41
NEK1Q96PY6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NEK1Q96PY6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.1■■■□□ 2.41
NEK1Q96PY6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
NEK1Q96PY6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NEK1Q96PY6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NEK1Q96PY6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
NEK1Q96PY6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.09■■■□□ 2.41
NEK1Q96PY6 BX255925.1-201ENST00000566954 1854 ntBASIC30.09■■■□□ 2.41
NEK1Q96PY6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
NEK1Q96PY6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.06■■■□□ 2.4
NEK1Q96PY6 LINC01003-201ENST00000564834 1764 ntBASIC30.06■■■□□ 2.4
NEK1Q96PY6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NEK1Q96PY6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NEK1Q96PY6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
NEK1Q96PY6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NEK1Q96PY6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NEK1Q96PY6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
NEK1Q96PY6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.04■■■□□ 2.4
NEK1Q96PY6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
NEK1Q96PY6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
NEK1Q96PY6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
NEK1Q96PY6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.03■■■□□ 2.4
NEK1Q96PY6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.03■■■□□ 2.4
NEK1Q96PY6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
NEK1Q96PY6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NEK1Q96PY6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NEK1Q96PY6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NEK1Q96PY6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.01■■■□□ 2.39
NEK1Q96PY6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
NEK1Q96PY6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NEK1Q96PY6 AC110285.7-201ENST00000624417 1536 ntBASIC30.01■■■□□ 2.39
NEK1Q96PY6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
NEK1Q96PY6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NEK1Q96PY6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
NEK1Q96PY6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
NEK1Q96PY6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
NEK1Q96PY6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NEK1Q96PY6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NEK1Q96PY6 LINC01971-201ENST00000617888 1048 ntBASIC29.99■■■□□ 2.39
NEK1Q96PY6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
NEK1Q96PY6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NEK1Q96PY6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.98■■■□□ 2.39
NEK1Q96PY6 AC018358.1-201ENST00000631079 1402 ntBASIC29.97■■■□□ 2.39
NEK1Q96PY6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.97■■■□□ 2.39
NEK1Q96PY6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
NEK1Q96PY6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
NEK1Q96PY6 ZNRF2P2-203ENST00000454624 420 ntBASIC29.96■■■□□ 2.39
NEK1Q96PY6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.96■■■□□ 2.39
NEK1Q96PY6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.96■■■□□ 2.39
NEK1Q96PY6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.95■■■□□ 2.39
NEK1Q96PY6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
NEK1Q96PY6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
NEK1Q96PY6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.93■■■□□ 2.38
NEK1Q96PY6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.93■■■□□ 2.38
NEK1Q96PY6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NEK1Q96PY6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
NEK1Q96PY6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
NEK1Q96PY6 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.92■■■□□ 2.38
NEK1Q96PY6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
NEK1Q96PY6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NEK1Q96PY6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.91■■■□□ 2.38
NEK1Q96PY6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
NEK1Q96PY6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NEK1Q96PY6 ABHD17AP4-201ENST00000411545 909 ntBASIC29.91■■■□□ 2.38
NEK1Q96PY6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.9■■■□□ 2.38
NEK1Q96PY6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.9■■■□□ 2.38
NEK1Q96PY6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NEK1Q96PY6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
NEK1Q96PY6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NEK1Q96PY6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NEK1Q96PY6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
NEK1Q96PY6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
NEK1Q96PY6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
NEK1Q96PY6 DUX4L11-201ENST00000611504 1267 ntBASIC29.87■■■□□ 2.37
NEK1Q96PY6 DUX4L12-201ENST00000614593 1267 ntBASIC29.87■■■□□ 2.37
NEK1Q96PY6 DUX4L14-201ENST00000621227 1267 ntBASIC29.87■■■□□ 2.37
NEK1Q96PY6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
NEK1Q96PY6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L13-201ENST00000554103 1267 ntBASIC29.86■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms