Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.96■■□□□ 1.75
IFT43Q96FT9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
IFT43Q96FT9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
IFT43Q96FT9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.95■■□□□ 1.75
IFT43Q96FT9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.95■■□□□ 1.74
IFT43Q96FT9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
IFT43Q96FT9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
IFT43Q96FT9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
IFT43Q96FT9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
IFT43Q96FT9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
IFT43Q96FT9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
IFT43Q96FT9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.94■■□□□ 1.74
IFT43Q96FT9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.94■■□□□ 1.74
IFT43Q96FT9 CR559946.2-201ENST00000623684 991 ntBASIC25.94■■□□□ 1.74
IFT43Q96FT9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.94■■□□□ 1.74
IFT43Q96FT9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
IFT43Q96FT9 WHAMMP2-203ENST00000563942 1603 ntBASIC25.93■■□□□ 1.74
IFT43Q96FT9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
IFT43Q96FT9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
IFT43Q96FT9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.92■■□□□ 1.74
IFT43Q96FT9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.92■■□□□ 1.74
IFT43Q96FT9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
IFT43Q96FT9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
IFT43Q96FT9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT43Q96FT9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.91■■□□□ 1.74
IFT43Q96FT9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
IFT43Q96FT9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.9■■□□□ 1.74
IFT43Q96FT9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT43Q96FT9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT43Q96FT9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
IFT43Q96FT9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.9■■□□□ 1.74
IFT43Q96FT9 AC100797.4-201ENST00000631653 1827 ntBASIC25.9■■□□□ 1.74
IFT43Q96FT9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
IFT43Q96FT9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
IFT43Q96FT9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
IFT43Q96FT9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
IFT43Q96FT9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
IFT43Q96FT9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.89■■□□□ 1.73
IFT43Q96FT9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.89■■□□□ 1.73
IFT43Q96FT9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
IFT43Q96FT9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
IFT43Q96FT9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.88■■□□□ 1.73
IFT43Q96FT9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT43Q96FT9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT43Q96FT9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
IFT43Q96FT9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
IFT43Q96FT9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT43Q96FT9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.88■■□□□ 1.73
IFT43Q96FT9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
IFT43Q96FT9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
IFT43Q96FT9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
IFT43Q96FT9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
IFT43Q96FT9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.87■■□□□ 1.73
IFT43Q96FT9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
IFT43Q96FT9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
IFT43Q96FT9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
IFT43Q96FT9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
IFT43Q96FT9 DRD5P2-201ENST00000421395 2012 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
IFT43Q96FT9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
IFT43Q96FT9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L13-201ENST00000554103 1267 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L15-201ENST00000611059 1267 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L23-201ENST00000615195 1269 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L24-201ENST00000617576 1269 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L22-201ENST00000618238 1269 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L20-201ENST00000619712 1269 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L21-201ENST00000622058 1269 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L10-201ENST00000622460 1267 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 DUX4L25-201ENST00000624915 1269 ntBASIC25.85■■□□□ 1.73
IFT43Q96FT9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.85■■□□□ 1.73
IFT43Q96FT9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
IFT43Q96FT9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
IFT43Q96FT9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
IFT43Q96FT9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
IFT43Q96FT9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
IFT43Q96FT9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
IFT43Q96FT9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
IFT43Q96FT9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.82■■□□□ 1.72
IFT43Q96FT9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.81■■□□□ 1.72
IFT43Q96FT9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.81■■□□□ 1.72
IFT43Q96FT9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
IFT43Q96FT9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
IFT43Q96FT9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
IFT43Q96FT9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
IFT43Q96FT9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
IFT43Q96FT9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
IFT43Q96FT9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
IFT43Q96FT9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
IFT43Q96FT9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
IFT43Q96FT9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.79■■□□□ 1.72
IFT43Q96FT9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
IFT43Q96FT9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
IFT43Q96FT9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
IFT43Q96FT9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
IFT43Q96FT9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
IFT43Q96FT9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.77■■□□□ 1.72
IFT43Q96FT9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.77■■□□□ 1.72
IFT43Q96FT9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
IFT43Q96FT9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms