Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.85■■□□□ 1.41
SLC47A1Q96FL8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SLC47A1Q96FL8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.85■■□□□ 1.41
SLC47A1Q96FL8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.84■■□□□ 1.41
SLC47A1Q96FL8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SLC47A1Q96FL8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.83■■□□□ 1.41
SLC47A1Q96FL8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC47A1Q96FL8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SLC47A1Q96FL8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC47A1Q96FL8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC47A1Q96FL8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC47A1Q96FL8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC47A1Q96FL8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC47A1Q96FL8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC47A1Q96FL8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC47A1Q96FL8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC47A1Q96FL8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC47A1Q96FL8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC47A1Q96FL8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SLC47A1Q96FL8 AC100797.4-201ENST00000631653 1827 ntBASIC23.79■■□□□ 1.4
SLC47A1Q96FL8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC47A1Q96FL8 AL449106.1-201ENST00000608517 1980 ntBASIC23.78■■□□□ 1.4
SLC47A1Q96FL8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC47A1Q96FL8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC47A1Q96FL8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC47A1Q96FL8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC47A1Q96FL8 MIR762-201ENST00000390236 83 ntBASIC23.76■■□□□ 1.39
SLC47A1Q96FL8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.76■■□□□ 1.39
SLC47A1Q96FL8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC47A1Q96FL8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC47A1Q96FL8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC47A1Q96FL8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SLC47A1Q96FL8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC47A1Q96FL8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC47A1Q96FL8 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.74■■□□□ 1.39
SLC47A1Q96FL8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SLC47A1Q96FL8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC47A1Q96FL8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC47A1Q96FL8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC47A1Q96FL8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC47A1Q96FL8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SLC47A1Q96FL8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC47A1Q96FL8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SLC47A1Q96FL8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC47A1Q96FL8 SUZ12P1-203ENST00000578195 985 ntBASIC23.71■■□□□ 1.39
SLC47A1Q96FL8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC47A1Q96FL8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.7■■□□□ 1.38
SLC47A1Q96FL8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.7■■□□□ 1.38
SLC47A1Q96FL8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SLC47A1Q96FL8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.7■■□□□ 1.38
SLC47A1Q96FL8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC47A1Q96FL8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC47A1Q96FL8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC47A1Q96FL8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SLC47A1Q96FL8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC47A1Q96FL8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC47A1Q96FL8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC47A1Q96FL8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC47A1Q96FL8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC47A1Q96FL8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC47A1Q96FL8 AP002414.2-202ENST00000590929 1450 ntBASIC23.68■■□□□ 1.38
SLC47A1Q96FL8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC47A1Q96FL8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SLC47A1Q96FL8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC47A1Q96FL8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.66■■□□□ 1.38
SLC47A1Q96FL8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SLC47A1Q96FL8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SLC47A1Q96FL8 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.65■■□□□ 1.38
SLC47A1Q96FL8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC47A1Q96FL8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC47A1Q96FL8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC47A1Q96FL8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SLC47A1Q96FL8 AC091060.1-201ENST00000623524 1766 ntBASIC23.63■■□□□ 1.37
SLC47A1Q96FL8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC47A1Q96FL8 AC005559.1-201ENST00000589661 871 ntBASIC23.63■■□□□ 1.37
SLC47A1Q96FL8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC47A1Q96FL8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC47A1Q96FL8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC47A1Q96FL8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC47A1Q96FL8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC47A1Q96FL8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.6■■□□□ 1.37
SLC47A1Q96FL8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC47A1Q96FL8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms