Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHCHD1Q96BP2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHCHD1Q96BP2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHCHD1Q96BP2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHCHD1Q96BP2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHCHD1Q96BP2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHCHD1Q96BP2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHCHD1Q96BP2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHCHD1Q96BP2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHCHD1Q96BP2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.56■□□□□ 0.56
CHCHD1Q96BP2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHCHD1Q96BP2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHCHD1Q96BP2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHCHD1Q96BP2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHCHD1Q96BP2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHCHD1Q96BP2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.55■□□□□ 0.56
CHCHD1Q96BP2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
CHCHD1Q96BP2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHCHD1Q96BP2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHCHD1Q96BP2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHCHD1Q96BP2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.54■□□□□ 0.56
CHCHD1Q96BP2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHCHD1Q96BP2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHCHD1Q96BP2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.53■□□□□ 0.56
CHCHD1Q96BP2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHCHD1Q96BP2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.53■□□□□ 0.56
CHCHD1Q96BP2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.53■□□□□ 0.56
CHCHD1Q96BP2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHCHD1Q96BP2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHCHD1Q96BP2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHCHD1Q96BP2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHCHD1Q96BP2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHCHD1Q96BP2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CHCHD1Q96BP2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHCHD1Q96BP2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHCHD1Q96BP2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHCHD1Q96BP2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.5■□□□□ 0.55
CHCHD1Q96BP2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHCHD1Q96BP2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHCHD1Q96BP2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHCHD1Q96BP2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHCHD1Q96BP2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHCHD1Q96BP2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHCHD1Q96BP2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHCHD1Q96BP2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHCHD1Q96BP2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHCHD1Q96BP2 AP004833.2-201ENST00000532228 1454 ntBASIC18.47■□□□□ 0.55
CHCHD1Q96BP2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHCHD1Q96BP2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHCHD1Q96BP2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHCHD1Q96BP2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHCHD1Q96BP2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.46■□□□□ 0.54
CHCHD1Q96BP2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHCHD1Q96BP2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHCHD1Q96BP2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHCHD1Q96BP2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CHCHD1Q96BP2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHCHD1Q96BP2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHCHD1Q96BP2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHCHD1Q96BP2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHCHD1Q96BP2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHCHD1Q96BP2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHCHD1Q96BP2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHCHD1Q96BP2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHCHD1Q96BP2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CHCHD1Q96BP2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.42■□□□□ 0.54
CHCHD1Q96BP2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
CHCHD1Q96BP2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHCHD1Q96BP2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHCHD1Q96BP2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHCHD1Q96BP2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHCHD1Q96BP2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.4■□□□□ 0.54
CHCHD1Q96BP2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHCHD1Q96BP2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHCHD1Q96BP2 DUSP8P4-201ENST00000399538 1761 ntBASIC18.39■□□□□ 0.53
CHCHD1Q96BP2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHCHD1Q96BP2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHCHD1Q96BP2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms