Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.8■□□□□ 0.92
COMMD1Q8N668 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD1Q8N668 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COMMD1Q8N668 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.79■□□□□ 0.92
COMMD1Q8N668 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD1Q8N668 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD1Q8N668 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
COMMD1Q8N668 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD1Q8N668 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COMMD1Q8N668 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD1Q8N668 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COMMD1Q8N668 AC108673.1-201ENST00000510422 1159 ntBASIC20.78■□□□□ 0.92
COMMD1Q8N668 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD1Q8N668 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD1Q8N668 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COMMD1Q8N668 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COMMD1Q8N668 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.76■□□□□ 0.91
COMMD1Q8N668 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.76■□□□□ 0.91
COMMD1Q8N668 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD1Q8N668 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD1Q8N668 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.76■□□□□ 0.91
COMMD1Q8N668 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COMMD1Q8N668 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COMMD1Q8N668 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD1Q8N668 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.75■□□□□ 0.91
COMMD1Q8N668 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COMMD1Q8N668 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD1Q8N668 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD1Q8N668 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD1Q8N668 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COMMD1Q8N668 BX255925.1-201ENST00000566954 1854 ntBASIC20.73■□□□□ 0.91
COMMD1Q8N668 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD1Q8N668 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD1Q8N668 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COMMD1Q8N668 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.73■□□□□ 0.91
COMMD1Q8N668 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
COMMD1Q8N668 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD1Q8N668 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD1Q8N668 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.72■□□□□ 0.91
COMMD1Q8N668 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COMMD1Q8N668 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COMMD1Q8N668 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
COMMD1Q8N668 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD1Q8N668 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.71■□□□□ 0.91
COMMD1Q8N668 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COMMD1Q8N668 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD1Q8N668 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COMMD1Q8N668 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COMMD1Q8N668 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD1Q8N668 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.7■□□□□ 0.9
COMMD1Q8N668 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD1Q8N668 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.7■□□□□ 0.9
COMMD1Q8N668 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.7■□□□□ 0.9
COMMD1Q8N668 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD1Q8N668 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
COMMD1Q8N668 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD1Q8N668 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD1Q8N668 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.69■□□□□ 0.9
COMMD1Q8N668 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD1Q8N668 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.69■□□□□ 0.9
COMMD1Q8N668 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.69■□□□□ 0.9
COMMD1Q8N668 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.69■□□□□ 0.9
COMMD1Q8N668 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.69■□□□□ 0.9
COMMD1Q8N668 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD1Q8N668 ABHD17AP4-201ENST00000411545 909 ntBASIC20.68■□□□□ 0.9
COMMD1Q8N668 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.68■□□□□ 0.9
COMMD1Q8N668 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD1Q8N668 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD1Q8N668 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD1Q8N668 DUX4L29-201ENST00000425409 679 ntBASIC20.67■□□□□ 0.9
COMMD1Q8N668 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
COMMD1Q8N668 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD1Q8N668 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD1Q8N668 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD1Q8N668 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
COMMD1Q8N668 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.65■□□□□ 0.9
COMMD1Q8N668 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD1Q8N668 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
COMMD1Q8N668 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COMMD1Q8N668 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD1Q8N668 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COMMD1Q8N668 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.64■□□□□ 0.9
COMMD1Q8N668 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD1Q8N668 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD1Q8N668 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD1Q8N668 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COMMD1Q8N668 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COMMD1Q8N668 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD1Q8N668 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.63■□□□□ 0.89
COMMD1Q8N668 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD1Q8N668 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD1Q8N668 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD1Q8N668 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COMMD1Q8N668 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD1Q8N668 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD1Q8N668 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD1Q8N668 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COMMD1Q8N668 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD1Q8N668 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD1Q8N668 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms