Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17■□□□□ 0.31
LINC01561Q8N1V8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01561Q8N1V8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 CAHM-201ENST00000604200 896 ntBASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01561Q8N1V8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01561Q8N1V8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.97■□□□□ 0.31
LINC01561Q8N1V8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LINC01561Q8N1V8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LINC01561Q8N1V8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.96■□□□□ 0.3
LINC01561Q8N1V8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
LINC01561Q8N1V8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01561Q8N1V8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LINC01561Q8N1V8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.95■□□□□ 0.3
LINC01561Q8N1V8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LINC01561Q8N1V8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.93■□□□□ 0.3
LINC01561Q8N1V8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LINC01561Q8N1V8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 AC135983.2-203ENST00000454486 1613 ntBASIC16.92■□□□□ 0.3
LINC01561Q8N1V8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LINC01561Q8N1V8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 MIR762-201ENST00000390236 83 ntBASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01561Q8N1V8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 AC136428.2-201ENST00000563187 214 ntBASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 AC097358.2-201ENST00000607541 1159 ntBASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01561Q8N1V8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01561Q8N1V8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01561Q8N1V8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01561Q8N1V8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 AC108673.1-201ENST00000510422 1159 ntBASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01561Q8N1V8 AC091060.1-201ENST00000623524 1766 ntBASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 LINC00273-201ENST00000539813 1452 ntBASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01561Q8N1V8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms