Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 ST7-AS1-201ENST00000456775 1889 ntBASIC31.99■■■□□ 2.71
DDX60Q8IY21 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
DDX60Q8IY21 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
DDX60Q8IY21 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
DDX60Q8IY21 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
DDX60Q8IY21 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.98■■■□□ 2.71
DDX60Q8IY21 RNF126P1-201ENST00000567452 1320 ntBASIC31.97■■■□□ 2.71
DDX60Q8IY21 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
DDX60Q8IY21 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
DDX60Q8IY21 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.96■■■□□ 2.71
DDX60Q8IY21 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
DDX60Q8IY21 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
DDX60Q8IY21 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.7
DDX60Q8IY21 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.7
DDX60Q8IY21 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
DDX60Q8IY21 AC022413.1-201ENST00000624602 984 ntBASIC31.95■■■□□ 2.7
DDX60Q8IY21 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
DDX60Q8IY21 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.93■■■□□ 2.7
DDX60Q8IY21 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
DDX60Q8IY21 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
DDX60Q8IY21 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
DDX60Q8IY21 MIR219A2-201ENST00000608502 1504 ntBASIC31.91■■■□□ 2.7
DDX60Q8IY21 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
DDX60Q8IY21 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.91■■■□□ 2.7
DDX60Q8IY21 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
DDX60Q8IY21 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
DDX60Q8IY21 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.9■■■□□ 2.7
DDX60Q8IY21 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.9■■■□□ 2.7
DDX60Q8IY21 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.89■■■□□ 2.7
DDX60Q8IY21 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
DDX60Q8IY21 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
DDX60Q8IY21 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
DDX60Q8IY21 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
DDX60Q8IY21 AC092296.2-201ENST00000589470 999 ntBASIC31.88■■■□□ 2.69
DDX60Q8IY21 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.88■■■□□ 2.69
DDX60Q8IY21 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
DDX60Q8IY21 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
DDX60Q8IY21 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
DDX60Q8IY21 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
DDX60Q8IY21 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
DDX60Q8IY21 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
DDX60Q8IY21 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.86■■■□□ 2.69
DDX60Q8IY21 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.84■■■□□ 2.69
DDX60Q8IY21 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
DDX60Q8IY21 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
DDX60Q8IY21 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
DDX60Q8IY21 NTF6A-201ENST00000591175 560 ntBASIC31.83■■■□□ 2.69
DDX60Q8IY21 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
DDX60Q8IY21 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.82■■■□□ 2.68
DDX60Q8IY21 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX60Q8IY21 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX60Q8IY21 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX60Q8IY21 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
DDX60Q8IY21 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX60Q8IY21 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
DDX60Q8IY21 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
DDX60Q8IY21 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
DDX60Q8IY21 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.8■■■□□ 2.68
DDX60Q8IY21 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.8■■■□□ 2.68
DDX60Q8IY21 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
DDX60Q8IY21 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
DDX60Q8IY21 AL157400.5-201ENST00000507624 621 ntBASIC31.79■■■□□ 2.68
DDX60Q8IY21 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.79■■■□□ 2.68
DDX60Q8IY21 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
DDX60Q8IY21 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
DDX60Q8IY21 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
DDX60Q8IY21 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
DDX60Q8IY21 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.78■■■□□ 2.68
DDX60Q8IY21 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.77■■■□□ 2.68
DDX60Q8IY21 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
DDX60Q8IY21 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.77■■■□□ 2.68
DDX60Q8IY21 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
DDX60Q8IY21 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
DDX60Q8IY21 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.76■■■□□ 2.67
DDX60Q8IY21 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.76■■■□□ 2.67
DDX60Q8IY21 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
DDX60Q8IY21 AC100797.4-201ENST00000631653 1827 ntBASIC31.74■■■□□ 2.67
DDX60Q8IY21 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
DDX60Q8IY21 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
DDX60Q8IY21 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
DDX60Q8IY21 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.72■■■□□ 2.67
DDX60Q8IY21 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
DDX60Q8IY21 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.72■■■□□ 2.67
DDX60Q8IY21 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
DDX60Q8IY21 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
DDX60Q8IY21 AP004833.2-201ENST00000532228 1454 ntBASIC31.71■■■□□ 2.67
DDX60Q8IY21 AC012354.3-201ENST00000623734 483 ntBASIC31.71■■■□□ 2.67
DDX60Q8IY21 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.71■■■□□ 2.67
DDX60Q8IY21 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
DDX60Q8IY21 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
DDX60Q8IY21 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
DDX60Q8IY21 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.69■■■□□ 2.66
DDX60Q8IY21 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.69■■■□□ 2.66
DDX60Q8IY21 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
DDX60Q8IY21 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
DDX60Q8IY21 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
DDX60Q8IY21 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.68■■■□□ 2.66
DDX60Q8IY21 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.68■■■□□ 2.66
DDX60Q8IY21 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
DDX60Q8IY21 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms