Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 DUS3YLR401C 2007 nt7.76□□□□□ -1.17
RPN9Q04062 MRN1YPL184C 1839 nt7.76□□□□□ -1.17
RPN9Q04062 GDH1YOR375C 1365 nt7.76□□□□□ -1.17
RPN9Q04062 TAD2YJL035C 753 nt7.76□□□□□ -1.17
RPN9Q04062 ALG7YBR243C 1347 nt7.75□□□□□ -1.17
RPN9Q04062 MAM3YOL060C 2121 nt7.75□□□□□ -1.17
RPN9Q04062 NDE1YMR145C 1683 nt7.74□□□□□ -1.17
RPN9Q04062 DIA4YHR011W 1341 nt7.74□□□□□ -1.17
RPN9Q04062 ELP4YPL101W 1371 nt7.73□□□□□ -1.17
RPN9Q04062 ARO3YDR035W 1113 nt7.73□□□□□ -1.17
RPN9Q04062 TDH1YJL052W 999 nt7.73□□□□□ -1.17
RPN9Q04062 HRA1HRA1 564 nt7.73□□□□□ -1.17
RPN9Q04062 NME1NME1 340 nt7.73□□□□□ -1.17
RPN9Q04062 ADE2YOR128C 1716 nt7.72□□□□□ -1.17
RPN9Q04062 MRP7YNL005C 1116 nt7.72□□□□□ -1.17
RPN9Q04062 YOR343CYOR343C 327 nt7.72□□□□□ -1.17
RPN9Q04062 CCR4YAL021C 2514 nt7.71□□□□□ -1.18
RPN9Q04062 AFG2YLR397C 2343 nt7.71□□□□□ -1.18
RPN9Q04062 ARG7YMR062C 1326 nt7.71□□□□□ -1.18
RPN9Q04062 YIL168WYIL168W 384 nt7.69□□□□□ -1.18
RPN9Q04062 snR4snR4 186 nt7.68□□□□□ -1.18
RPN9Q04062 SNU66YOR308C 1764 nt7.68□□□□□ -1.18
RPN9Q04062 KTR4YBR199W 1395 nt7.68□□□□□ -1.18
RPN9Q04062 BUD20YLR074C 501 nt7.67□□□□□ -1.18
RPN9Q04062 NUP53YMR153W 1428 nt7.67□□□□□ -1.18
RPN9Q04062 ADE1YAR015W 921 nt7.66□□□□□ -1.18
RPN9Q04062 CPR2YHR057C 618 nt7.65□□□□□ -1.18
RPN9Q04062 SNP1YIL061C 903 nt7.65□□□□□ -1.18
RPN9Q04062 PSP2YML017W 1782 nt7.64□□□□□ -1.19
RPN9Q04062 tL(UAA)B1tL(UAA)B1 84 nt7.64□□□□□ -1.19
RPN9Q04062 tL(UAA)B2tL(UAA)B2 84 nt7.64□□□□□ -1.19
RPN9Q04062 tL(UAA)DtL(UAA)D 84 nt7.64□□□□□ -1.19
RPN9Q04062 SUP51tL(UAA)J 84 nt7.64□□□□□ -1.19
RPN9Q04062 tL(UAA)KtL(UAA)K 84 nt7.64□□□□□ -1.19
RPN9Q04062 tL(UAA)LtL(UAA)L 84 nt7.64□□□□□ -1.19
RPN9Q04062 tL(UAA)NtL(UAA)N 84 nt7.64□□□□□ -1.19
RPN9Q04062 GGC1YDL198C 903 nt7.63□□□□□ -1.19
RPN9Q04062 RPL2AYFR031C-A 765 nt7.63□□□□□ -1.19
RPN9Q04062 BEM1YBR200W 1656 nt7.63□□□□□ -1.19
RPN9Q04062 YRF1-1YDR545W 5391 nt7.61□□□□□ -1.19
RPN9Q04062 YRF1-5YLR467W 5391 nt7.61□□□□□ -1.19
RPN9Q04062 YRF1-8YOR396W 5391 nt7.61□□□□□ -1.19
RPN9Q04062 RPL12BYDR418W 498 nt7.61□□□□□ -1.19
RPN9Q04062 CTF3YLR381W 2202 nt7.61□□□□□ -1.19
RPN9Q04062 ADE16YLR028C 1776 nt7.61□□□□□ -1.19
RPN9Q04062 YAL016C-AYAL016C-A 315 nt7.6□□□□□ -1.19
RPN9Q04062 APT1YML022W 564 nt7.6□□□□□ -1.19
RPN9Q04062 AIM34YMR003W 597 nt7.6□□□□□ -1.19
RPN9Q04062 ELP6YMR312W 822 nt7.6□□□□□ -1.19
RPN9Q04062 CPT1YNL130C 1182 nt7.6□□□□□ -1.19
RPN9Q04062 TOP3YLR234W 1971 nt7.6□□□□□ -1.19
RPN9Q04062 SPR1YOR190W 1338 nt7.59□□□□□ -1.19
RPN9Q04062 CDA1YLR307W 906 nt7.58□□□□□ -1.2
RPN9Q04062 FUS3YBL016W 1062 nt7.58□□□□□ -1.2
RPN9Q04062 MNN9YPL050C 1188 nt7.58□□□□□ -1.2
RPN9Q04062 YIL108WYIL108W 2091 nt7.57□□□□□ -1.2
RPN9Q04062 DST1YGL043W 930 nt7.57□□□□□ -1.2
RPN9Q04062 YJL043WYJL043W 774 nt7.57□□□□□ -1.2
RPN9Q04062 PMT1YDL095W 2454 nt7.56□□□□□ -1.2
RPN9Q04062 MTC6YHR151C 1581 nt7.56□□□□□ -1.2
RPN9Q04062 HAC1YFL031W 717 nt7.56□□□□□ -1.2
RPN9Q04062 PNS1YOR161C 1620 nt7.56□□□□□ -1.2
RPN9Q04062 TES1YJR019C 1050 nt7.55□□□□□ -1.2
RPN9Q04062 TOS1YBR162C 1368 nt7.55□□□□□ -1.2
RPN9Q04062 MET13YGL125W 1803 nt7.55□□□□□ -1.2
RPN9Q04062 STE3YKL178C 1413 nt7.54□□□□□ -1.2
RPN9Q04062 ITR1YDR497C 1755 nt7.54□□□□□ -1.2
RPN9Q04062 TPO1YLL028W 1761 nt7.54□□□□□ -1.2
RPN9Q04062 YDR476CYDR476C 675 nt7.54□□□□□ -1.2
RPN9Q04062 EDC2YER035W 438 nt7.54□□□□□ -1.2
RPN9Q04062 AOS1YPR180W 1044 nt7.54□□□□□ -1.2
RPN9Q04062 PFS2YNL317W 1398 nt7.52□□□□□ -1.21
RPN9Q04062 YHR033WYHR033W 1272 nt7.52□□□□□ -1.21
RPN9Q04062 MDH2YOL126C 1134 nt7.52□□□□□ -1.21
RPN9Q04062 RRP43YCR035C 1185 nt7.51□□□□□ -1.21
RPN9Q04062 CKB1YGL019W 837 nt7.51□□□□□ -1.21
RPN9Q04062 RRT6YGL146C 936 nt7.5□□□□□ -1.21
RPN9Q04062 HAM1YJR069C 594 nt7.5□□□□□ -1.21
RPN9Q04062 YNL295WYNL295W 1575 nt7.5□□□□□ -1.21
RPN9Q04062 PET494YNR045W 1470 nt7.49□□□□□ -1.21
RPN9Q04062 PMT7YDR307W 1989 nt7.49□□□□□ -1.21
RPN9Q04062 AVL9YLR114C 2295 nt7.49□□□□□ -1.21
RPN9Q04062 CRN1YLR429W 1956 nt7.48□□□□□ -1.21
RPN9Q04062 PEX28YHR150W 1740 nt7.47□□□□□ -1.21
RPN9Q04062 YEL034C-AYEL034C-A 603 nt7.47□□□□□ -1.21
RPN9Q04062 NAS6YGR232W 687 nt7.47□□□□□ -1.21
RPN9Q04062 INP54YOL065C 1155 nt7.47□□□□□ -1.21
RPN9Q04062 PDC5YLR134W 1692 nt7.47□□□□□ -1.21
RPN9Q04062 YDR215CYDR215C 414 nt7.46□□□□□ -1.22
RPN9Q04062 PET10YKR046C 852 nt7.46□□□□□ -1.22
RPN9Q04062 ERV2YPR037C 591 nt7.46□□□□□ -1.22
RPN9Q04062 MET8YBR213W 825 nt7.46□□□□□ -1.22
RPN9Q04062 HSV2YGR223C 1347 nt7.45□□□□□ -1.22
RPN9Q04062 MSB3YNL293W 1902 nt7.44□□□□□ -1.22
RPN9Q04062 RSC9YML127W 1746 nt7.44□□□□□ -1.22
RPN9Q04062 RUP1YOR138C 2016 nt7.44□□□□□ -1.22
RPN9Q04062 CHA1YCL064C 1083 nt7.44□□□□□ -1.22
RPN9Q04062 SNF7YLR025W 723 nt7.44□□□□□ -1.22
RPN9Q04062 PRC1YMR297W 1599 nt7.44□□□□□ -1.22
RPN9Q04062 SGF73YGL066W 1974 nt7.43□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms