RNA–Protein interactions for RNA: YNL317W

PFS2, Transcript of Integral subunit of the pre-mRNA CPF complex, yeastyeast

Gene PFS2, Length 1,398 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFS2YNL317W MON2P48563 1636 aaPredicted RBP12.9□□□□□ -0.34
PFS2YNL317W INO80P53115 1489 aa12.76□□□□□ -0.37
PFS2YNL317W TCB3Q03640 1545 aaKnown RBP12.37□□□□□ -0.43
PFS2YNL317W TY1B-DR4Q07793 1604 aa12.32□□□□□ -0.44
PFS2YNL317W SWR1Q05471 1514 aa12.31□□□□□ -0.44
PFS2YNL317W SGS1P35187 1447 aa12.2□□□□□ -0.46
PFS2YNL317W DNA2P38859 1522 aa12.19□□□□□ -0.46
PFS2YNL317W KOG1P38873 1557 aa12.11□□□□□ -0.47
PFS2YNL317W SPA2P23201 1466 aaKnown RBP12.09□□□□□ -0.47
PFS2YNL317W HSL1P34244 1518 aa11.91□□□□□ -0.5
PFS2YNL317W SPT6P23615 1451 aaKnown RBP11.86□□□□□ -0.51
PFS2YNL317W SSN2P38931 1420 aa11.84□□□□□ -0.51
PFS2YNL317W HIR3P47171 1648 aa11.65□□□□□ -0.54
PFS2YNL317W RSE1Q04693 1361 aaKnown RBP11.59□□□□□ -0.55
PFS2YNL317W SKI3P17883 1432 aaKnown RBP11.56□□□□□ -0.56
PFS2YNL317W DRS1P32892 752 aaKnown RBP11.54□□□□□ -0.56
PFS2YNL317W THO2P53552 1597 aaKnown RBP11.54□□□□□ -0.56
PFS2YNL317W BUD4P47136 1447 aa11.48□□□□□ -0.57
PFS2YNL317W ECM5Q03214 1411 aa11.48□□□□□ -0.57
PFS2YNL317W XRN1P22147 1528 aaKnown RBP11.42□□□□□ -0.58
PFS2YNL317W MDS3P53094 1487 aa11.37□□□□□ -0.59
PFS2YNL317W NOP2P40991 618 aaKnown RBP11.32□□□□□ -0.6
PFS2YNL317W PEP1P32319 1579 aa11.28□□□□□ -0.6
PFS2YNL317W ATG2P53855 1592 aa11.26□□□□□ -0.61
PFS2YNL317W REV3P14284 1504 aa11.26□□□□□ -0.61
PFS2YNL317W SIN3P22579 1536 aa11.19□□□□□ -0.62
PFS2YNL317W BFR2Q06631 534 aaKnown RBP11.13□□□□□ -0.63
PFS2YNL317W NSR1P27476 414 aaKnown RBP RIP-Chip data11.1□□□□□ -0.63not detected
PFS2YNL317W SSK2P53599 1579 aa11.08□□□□□ -0.64
PFS2YNL317W MTC1P47018 478 aaKnown RBP11.06□□□□□ -0.64
PFS2YNL317W CHD1P32657 1468 aa11.06□□□□□ -0.64
PFS2YNL317W BPT1P14772 1559 aa11.04□□□□□ -0.64
PFS2YNL317W MMS22Q06164 1454 aa11.01□□□□□ -0.65
PFS2YNL317W ESP1Q03018 1630 aa11.01□□□□□ -0.65
PFS2YNL317W TAF2P23255 1407 aa11□□□□□ -0.65
PFS2YNL317W MYO2P19524 1574 aaKnown RBP10.9□□□□□ -0.66
PFS2YNL317W YCF1P39109 1515 aaKnown RBP10.88□□□□□ -0.67
PFS2YNL317W YPK9Q12697 1472 aa10.86□□□□□ -0.67
PFS2YNL317W UFD4P33202 1483 aa10.82□□□□□ -0.68
PFS2YNL317W SCC2Q04002 1493 aa10.82□□□□□ -0.68
PFS2YNL317W RPO31P04051 1460 aa10.76□□□□□ -0.69
PFS2YNL317W TY2B-LR1P0C2J3 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-FP0CX63 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-GR2P0CX64 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-CP25384 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-DR2Q03494 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY1B-DR1Q03855 1755 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-DR3Q07791 1770 aaKnown RBP10.72□□□□□ -0.69
PFS2YNL317W TY2B-OR1Q12113 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-DR1Q12472 1770 aa10.72□□□□□ -0.69
PFS2YNL317W TY2B-OR2Q12501 1770 aa10.72□□□□□ -0.69
PFS2YNL317W ENP1P38333 483 aaKnown RBP10.7□□□□□ -0.7
PFS2YNL317W CDC25P04821 1589 aa10.69□□□□□ -0.7
PFS2YNL317W SPP41P38904 1435 aa10.67□□□□□ -0.7
PFS2YNL317W TRM732Q03496 1420 aa10.65□□□□□ -0.7
PFS2YNL317W TY1B-BRQ12193 1756 aa10.65□□□□□ -0.7
PFS2YNL317W TY1B-GR3Q12316 1755 aa10.65□□□□□ -0.7
PFS2YNL317W TY1B-ORQ92393 1755 aa10.65□□□□□ -0.7
PFS2YNL317W IKI3Q06706 1349 aaKnown RBP10.64□□□□□ -0.71
PFS2YNL317W ESC1Q03661 1658 aaKnown RBP10.63□□□□□ -0.71
PFS2YNL317W STU1P38198 1513 aa10.6□□□□□ -0.71
PFS2YNL317W TOP2P06786 1428 aaKnown RBP10.59□□□□□ -0.71
PFS2YNL317W TY2B-BQ12491 1770 aa10.59□□□□□ -0.71
PFS2YNL317W YTA7P40340 1379 aa10.58□□□□□ -0.72
PFS2YNL317W DNF1P32660 1571 aa10.58□□□□□ -0.72
PFS2YNL317W TY1B-DR3Q99231 1755 aa10.58□□□□□ -0.72
PFS2YNL317W SAS10Q12136 610 aaPredicted RBP10.57□□□□□ -0.72
PFS2YNL317W TY1B-HO13535 1793 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-DR5P0C2I2 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-DR6P0C2I3 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-LR2P0C2I5 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-LR3P0C2I6 1755 aaKnown RBP10.57□□□□□ -0.72
PFS2YNL317W TY1B-PR1P0C2I9 1755 aaKnown RBP10.57□□□□□ -0.72
PFS2YNL317W TY1B-PR2P0C2J0 1756 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-PR3P0C2J1 1755 aaKnown RBP10.57□□□□□ -0.72
PFS2YNL317W TY1B-JR1P47098 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-ML2Q03434 1755 aaKnown RBP10.57□□□□□ -0.72
PFS2YNL317W TY1B-ER1Q03612 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-ML1Q04711 1755 aaKnown RBP10.57□□□□□ -0.72
PFS2YNL317W TY1B-GR2Q12269 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-OLQ12273 1755 aa10.57□□□□□ -0.72
PFS2YNL317W TY1B-PLQ12414 1755 aaKnown RBP10.57□□□□□ -0.72
PFS2YNL317W RKR1Q04781 1562 aa10.57□□□□□ -0.72
PFS2YNL317W FAP1P53971 965 aa10.56□□□□□ -0.72
PFS2YNL317W POL1P13382 1468 aa10.56□□□□□ -0.72
PFS2YNL317W PAN1P32521 1480 aa10.56□□□□□ -0.72
PFS2YNL317W MET5P47169 1442 aa10.55□□□□□ -0.72
PFS2YNL317W POL5P39985 1022 aaKnown RBP10.54□□□□□ -0.72
PFS2YNL317W CAB3P36076 571 aa10.53□□□□□ -0.72
PFS2YNL317W RPA190P10964 1664 aaKnown RBP10.52□□□□□ -0.72
PFS2YNL317W STH1P32597 1359 aa10.49□□□□□ -0.73
PFS2YNL317W EBP2P36049 427 aaKnown RBP10.48□□□□□ -0.73
PFS2YNL317W SEC3P33332 1336 aaKnown RBP10.47□□□□□ -0.73
PFS2YNL317W SMC4Q12267 1418 aa10.45□□□□□ -0.74
PFS2YNL317W YOR1P53049 1477 aa10.45□□□□□ -0.74
PFS2YNL317W NUP170P38181 1502 aa10.44□□□□□ -0.74
PFS2YNL317W RQC2Q12532 1038 aaKnown RBP10.44□□□□□ -0.74
PFS2YNL317W SSM4P40318 1319 aa10.42□□□□□ -0.74
PFS2YNL317W LTE1P07866 1435 aa10.41□□□□□ -0.74
PFS2YNL317W SPT7P35177 1332 aa10.4□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms