RNA–Protein interactions for RNA: snR4

snR4, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeastyeast

Gene snR4, Length 186 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR4snR4 SPA2P23201 1466 aaKnown RBP12.98□□□□□ -0.33
snR4snR4 SGS1P35187 1447 aa12.84□□□□□ -0.35
snR4snR4 SSN2P38931 1420 aa12.67□□□□□ -0.38
snR4snR4 INO80P53115 1489 aa12.55□□□□□ -0.4
snR4snR4 SKI3P17883 1432 aaKnown RBP12.23□□□□□ -0.45
snR4snR4 DRS1P32892 752 aaKnown RBP12.13□□□□□ -0.47
snR4snR4 TCB3Q03640 1545 aaKnown RBP12.07□□□□□ -0.48
snR4snR4 TY1B-DR4Q07793 1604 aa11.93□□□□□ -0.5
snR4snR4 CHD1P32657 1468 aa11.86□□□□□ -0.51
snR4snR4 HSL1P34244 1518 aa11.81□□□□□ -0.52
snR4snR4 MMS22Q06164 1454 aa11.75□□□□□ -0.53
snR4snR4 SPT6P23615 1451 aaKnown RBP11.7□□□□□ -0.54
snR4snR4 XRN1P22147 1528 aaKnown RBP11.67□□□□□ -0.54
snR4snR4 HIR3P47171 1648 aa11.62□□□□□ -0.55
snR4snR4 THO2P53552 1597 aaKnown RBP11.62□□□□□ -0.55
snR4snR4 SIN3P22579 1536 aa11.6□□□□□ -0.55
snR4snR4 REV3P14284 1504 aa11.55□□□□□ -0.56
snR4snR4 SSK2P53599 1579 aa11.53□□□□□ -0.56
snR4snR4 UFD4P33202 1483 aa11.52□□□□□ -0.56
snR4snR4 NOP2P40991 618 aaKnown RBP11.49□□□□□ -0.57
snR4snR4 MYO2P19524 1574 aaKnown RBP11.43□□□□□ -0.58
snR4snR4 STU1P38198 1513 aa11.4□□□□□ -0.59
snR4snR4 ESP1Q03018 1630 aa11.38□□□□□ -0.59
snR4snR4 NSR1P27476 414 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
snR4snR4 POL1P13382 1468 aa11.34□□□□□ -0.59
snR4snR4 TAF2P23255 1407 aa11.32□□□□□ -0.6
snR4snR4 TRM732Q03496 1420 aa11.31□□□□□ -0.6
snR4snR4 SPP41P38904 1435 aa11.26□□□□□ -0.61
snR4snR4 YTA7P40340 1379 aa11.26□□□□□ -0.61
snR4snR4 NUP170P38181 1502 aa11.25□□□□□ -0.61
snR4snR4 SWR1Q05471 1514 aa11.25□□□□□ -0.61
snR4snR4 MON2P48563 1636 aaPredicted RBP11.24□□□□□ -0.61
snR4snR4 BPT1P14772 1559 aa11.2□□□□□ -0.62
snR4snR4 IKI3Q06706 1349 aaKnown RBP11.2□□□□□ -0.62
snR4snR4 ECM5Q03214 1411 aa11.18□□□□□ -0.62
snR4snR4 MYO4P32492 1471 aa11.17□□□□□ -0.62
snR4snR4 RSE1Q04693 1361 aaKnown RBP11.16□□□□□ -0.62
snR4snR4 YPK9Q12697 1472 aa11.14□□□□□ -0.63
snR4snR4 SCC2Q04002 1493 aa11.13□□□□□ -0.63
snR4snR4 YOR1P53049 1477 aa11.1□□□□□ -0.63
snR4snR4 DNA2P38859 1522 aa11.09□□□□□ -0.63
snR4snR4 RKR1Q04781 1562 aa11.08□□□□□ -0.64
snR4snR4 BFR2Q06631 534 aaKnown RBP11.06□□□□□ -0.64
snR4snR4 ATG2P53855 1592 aa11.06□□□□□ -0.64
snR4snR4 BUD4P47136 1447 aa11.03□□□□□ -0.64
snR4snR4 SAS10Q12136 610 aaPredicted RBP11.02□□□□□ -0.65
snR4snR4 ENP1P38333 483 aaKnown RBP11.01□□□□□ -0.65
snR4snR4 MLP2P40457 1679 aa11.01□□□□□ -0.65
snR4snR4 SNQ2P32568 1501 aaKnown RBP10.99□□□□□ -0.65
snR4snR4 SSM4P40318 1319 aa10.98□□□□□ -0.65
snR4snR4 SMC4Q12267 1418 aa10.96□□□□□ -0.65
snR4snR4 STH1P32597 1359 aa10.94□□□□□ -0.66
snR4snR4 TAF7Q05021 590 aa10.91□□□□□ -0.66
snR4snR4 RPO31P04051 1460 aa10.9□□□□□ -0.66
snR4snR4 POL5P39985 1022 aaKnown RBP10.88□□□□□ -0.67
snR4snR4 YCF1P39109 1515 aaKnown RBP10.88□□□□□ -0.67
snR4snR4 PDR15Q04182 1529 aaKnown RBP10.88□□□□□ -0.67
snR4snR4 PAN1P32521 1480 aa10.87□□□□□ -0.67
snR4snR4 TOP2P06786 1428 aaKnown RBP10.87□□□□□ -0.67
snR4snR4 SEC3P33332 1336 aaKnown RBP10.86□□□□□ -0.67
snR4snR4 PEP1P32319 1579 aa10.86□□□□□ -0.67
snR4snR4 TY1B-DR3Q99231 1755 aa10.86□□□□□ -0.67
snR4snR4 PDR10P51533 1564 aa10.86□□□□□ -0.67
snR4snR4 ULS1Q08562 1619 aa10.85□□□□□ -0.67
snR4snR4 KOG1P38873 1557 aa10.84□□□□□ -0.67
snR4snR4 GEA1P47102 1408 aaPredicted RBP10.83□□□□□ -0.68
snR4snR4 TY2B-LR1P0C2J3 1770 aa10.82□□□□□ -0.68
snR4snR4 TY2B-FP0CX63 1770 aa10.82□□□□□ -0.68
snR4snR4 TY2B-GR2P0CX64 1770 aa10.82□□□□□ -0.68
snR4snR4 TY2B-CP25384 1770 aa10.82□□□□□ -0.68
snR4snR4 TY2B-DR2Q03494 1770 aa10.82□□□□□ -0.68
snR4snR4 TY1B-DR1Q03855 1755 aa10.82□□□□□ -0.68
snR4snR4 TY2B-DR3Q07791 1770 aaKnown RBP10.82□□□□□ -0.68
snR4snR4 TY2B-OR1Q12113 1770 aa10.82□□□□□ -0.68
snR4snR4 TY2B-DR1Q12472 1770 aa10.82□□□□□ -0.68
snR4snR4 TY2B-OR2Q12501 1770 aa10.82□□□□□ -0.68
snR4snR4 TSC11P40061 1430 aa10.79□□□□□ -0.68
snR4snR4 TY2B-BQ12491 1770 aa10.76□□□□□ -0.69
snR4snR4 TY3B-GQ99315 1547 aa10.76□□□□□ -0.69
snR4snR4 SPT7P35177 1332 aa10.76□□□□□ -0.69
snR4snR4 ESC1Q03661 1658 aaKnown RBP10.71□□□□□ -0.69
snR4snR4 YBT1P32386 1661 aa10.69□□□□□ -0.7
snR4snR4 MDS3P53094 1487 aa10.68□□□□□ -0.7
snR4snR4 PRS1P32895 427 aaKnown RBP10.65□□□□□ -0.7
snR4snR4 RTT106P40161 455 aa10.65□□□□□ -0.7
snR4snR4 NUP159P40477 1460 aa10.65□□□□□ -0.7
snR4snR4 TY1B-HO13535 1793 aa10.65□□□□□ -0.71
snR4snR4 TY1B-DR5P0C2I2 1755 aa10.65□□□□□ -0.71
snR4snR4 TY1B-DR6P0C2I3 1755 aa10.65□□□□□ -0.71
snR4snR4 TY1B-LR2P0C2I5 1755 aa10.65□□□□□ -0.71
snR4snR4 TY1B-LR3P0C2I6 1755 aaKnown RBP10.65□□□□□ -0.71
snR4snR4 TY1B-PR1P0C2I9 1755 aaKnown RBP10.65□□□□□ -0.71
snR4snR4 TY1B-PR2P0C2J0 1756 aa10.65□□□□□ -0.71
snR4snR4 TY1B-PR3P0C2J1 1755 aaKnown RBP10.65□□□□□ -0.71
snR4snR4 TY1B-JR1P47098 1755 aa10.65□□□□□ -0.71
snR4snR4 TY1B-ML2Q03434 1755 aaKnown RBP10.65□□□□□ -0.71
snR4snR4 TY1B-ER1Q03612 1755 aa10.65□□□□□ -0.71
snR4snR4 TY1B-ML1Q04711 1755 aaKnown RBP10.65□□□□□ -0.71
snR4snR4 TY1B-GR2Q12269 1755 aa10.65□□□□□ -0.71
snR4snR4 TY1B-OLQ12273 1755 aa10.65□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms