RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C INO80P53115 1489 aa18.33■□□□□ 0.52
BUD20YLR074C MON2P48563 1636 aaPredicted RBP18.28■□□□□ 0.52
BUD20YLR074C DNA2P38859 1522 aa17.45■□□□□ 0.38
BUD20YLR074C SWR1Q05471 1514 aa17.21■□□□□ 0.35
BUD20YLR074C RSE1Q04693 1361 aaKnown RBP17.11■□□□□ 0.33
BUD20YLR074C KOG1P38873 1557 aa17.08■□□□□ 0.32
BUD20YLR074C TCB3Q03640 1545 aaKnown RBP16.82■□□□□ 0.28
BUD20YLR074C TY1B-DR4Q07793 1604 aa16.8■□□□□ 0.28
BUD20YLR074C SGS1P35187 1447 aa16.27■□□□□ 0.19
BUD20YLR074C SPA2P23201 1466 aaKnown RBP16.22■□□□□ 0.19
BUD20YLR074C SPT6P23615 1451 aaKnown RBP16.14■□□□□ 0.17
BUD20YLR074C HSL1P34244 1518 aa16.12■□□□□ 0.17
BUD20YLR074C MTC1P47018 478 aaKnown RBP16.07■□□□□ 0.16
BUD20YLR074C ECM5Q03214 1411 aa16.07■□□□□ 0.16
BUD20YLR074C BUD4P47136 1447 aa15.82■□□□□ 0.12
BUD20YLR074C THO2P53552 1597 aaKnown RBP15.78■□□□□ 0.12
BUD20YLR074C HIR3P47171 1648 aa15.75■□□□□ 0.11
BUD20YLR074C MDS3P53094 1487 aa15.7■□□□□ 0.1
BUD20YLR074C REV3P14284 1504 aa15.57■□□□□ 0.08
BUD20YLR074C PEP1P32319 1579 aa15.49■□□□□ 0.07
BUD20YLR074C XRN1P22147 1528 aaKnown RBP15.4■□□□□ 0.06
BUD20YLR074C BPT1P14772 1559 aa15.34■□□□□ 0.05
BUD20YLR074C ATG2P53855 1592 aa15.26■□□□□ 0.03
BUD20YLR074C MIF2P35201 549 aa15.12■□□□□ 0.01
BUD20YLR074C YCF1P39109 1515 aaKnown RBP15.05■□□□□ -0
BUD20YLR074C SKI3P17883 1432 aaKnown RBP15.01□□□□□ -0.01
BUD20YLR074C TAF2P23255 1407 aa14.94□□□□□ -0.02
BUD20YLR074C SSK2P53599 1579 aa14.91□□□□□ -0.02
BUD20YLR074C SIN3P22579 1536 aa14.8□□□□□ -0.04
BUD20YLR074C UFD4P33202 1483 aa14.78□□□□□ -0.04
BUD20YLR074C MET5P47169 1442 aa14.72□□□□□ -0.05
BUD20YLR074C SSN2P38931 1420 aa14.68□□□□□ -0.06
BUD20YLR074C MYO2P19524 1574 aaKnown RBP14.65□□□□□ -0.06
BUD20YLR074C LTE1P07866 1435 aa14.65□□□□□ -0.06
BUD20YLR074C ESP1Q03018 1630 aa14.63□□□□□ -0.07
BUD20YLR074C DNF1P32660 1571 aa14.61□□□□□ -0.07
BUD20YLR074C CHD1P32657 1468 aa14.6□□□□□ -0.07
BUD20YLR074C YFR006WP43590 535 aa14.59□□□□□ -0.07
BUD20YLR074C CDC25P04821 1589 aa14.59□□□□□ -0.07
BUD20YLR074C BNI1P41832 1953 aa14.56□□□□□ -0.08
BUD20YLR074C SCC2Q04002 1493 aa14.55□□□□□ -0.08
BUD20YLR074C ABP1P15891 592 aaKnown RBP14.52□□□□□ -0.09
BUD20YLR074C ITT1Q04638 464 aa14.52□□□□□ -0.09
BUD20YLR074C YPK9Q12697 1472 aa14.5□□□□□ -0.09
BUD20YLR074C RPA190P10964 1664 aaKnown RBP14.49□□□□□ -0.09
BUD20YLR074C ESC1Q03661 1658 aaKnown RBP14.49□□□□□ -0.09
BUD20YLR074C RQC2Q12532 1038 aaKnown RBP14.49□□□□□ -0.09
BUD20YLR074C RPO31P04051 1460 aa14.47□□□□□ -0.09
BUD20YLR074C RKR1Q04781 1562 aa14.44□□□□□ -0.1
BUD20YLR074C PAN1P32521 1480 aa14.42□□□□□ -0.1
BUD20YLR074C GEA2P39993 1459 aaKnown RBP14.4□□□□□ -0.1
BUD20YLR074C TY1B-BRQ12193 1756 aa14.38□□□□□ -0.11
BUD20YLR074C TY1B-GR3Q12316 1755 aa14.38□□□□□ -0.11
BUD20YLR074C TY1B-ORQ92393 1755 aa14.38□□□□□ -0.11
BUD20YLR074C TY2B-LR1P0C2J3 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-FP0CX63 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-GR2P0CX64 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-CP25384 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-DR2Q03494 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY1B-DR1Q03855 1755 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-DR3Q07791 1770 aaKnown RBP14.36□□□□□ -0.11
BUD20YLR074C TY2B-OR1Q12113 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-DR1Q12472 1770 aa14.36□□□□□ -0.11
BUD20YLR074C TY2B-OR2Q12501 1770 aa14.36□□□□□ -0.11
BUD20YLR074C MMS1Q06211 1407 aa14.32□□□□□ -0.12
BUD20YLR074C DRS1P32892 752 aaKnown RBP14.22□□□□□ -0.13
BUD20YLR074C TOP2P06786 1428 aaKnown RBP14.18□□□□□ -0.14
BUD20YLR074C TY1B-HO13535 1793 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-DR5P0C2I2 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-DR6P0C2I3 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-LR2P0C2I5 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-LR3P0C2I6 1755 aaKnown RBP14.17□□□□□ -0.14
BUD20YLR074C TY1B-PR1P0C2I9 1755 aaKnown RBP14.17□□□□□ -0.14
BUD20YLR074C TY1B-PR2P0C2J0 1756 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-PR3P0C2J1 1755 aaKnown RBP14.17□□□□□ -0.14
BUD20YLR074C TY1B-JR1P47098 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-ML2Q03434 1755 aaKnown RBP14.17□□□□□ -0.14
BUD20YLR074C TY1B-ER1Q03612 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-ML1Q04711 1755 aaKnown RBP14.17□□□□□ -0.14
BUD20YLR074C TY1B-GR2Q12269 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-OLQ12273 1755 aa14.17□□□□□ -0.14
BUD20YLR074C TY1B-PLQ12414 1755 aaKnown RBP14.17□□□□□ -0.14
BUD20YLR074C MMS22Q06164 1454 aa14.17□□□□□ -0.14
BUD20YLR074C DRS2P39524 1355 aa14.16□□□□□ -0.14
BUD20YLR074C TRM732Q03496 1420 aa14.15□□□□□ -0.14
BUD20YLR074C TY2B-BQ12491 1770 aa14.15□□□□□ -0.14
BUD20YLR074C IRC20Q06554 1556 aa14.13□□□□□ -0.15
BUD20YLR074C YRF1-1P0CX20 1796 aa14.09□□□□□ -0.15
BUD20YLR074C YRF1-5P0CX21 1796 aa14.09□□□□□ -0.15
BUD20YLR074C YRF1-8P0CX22 1796 aa14.09□□□□□ -0.15
BUD20YLR074C TY1B-DR3Q99231 1755 aa14.06□□□□□ -0.16
BUD20YLR074C VPS15P22219 1454 aa14.06□□□□□ -0.16
BUD20YLR074C NUP159P40477 1460 aa14.05□□□□□ -0.16
BUD20YLR074C DNF2Q12675 1612 aa13.94□□□□□ -0.18
BUD20YLR074C SPP41P38904 1435 aa13.91□□□□□ -0.18
BUD20YLR074C TY1B-JR2P47100 1755 aaKnown RBP13.86□□□□□ -0.19
BUD20YLR074C TY1B-ER2Q03619 1755 aa13.86□□□□□ -0.19
BUD20YLR074C TY1B-MR1Q04214 1755 aa13.86□□□□□ -0.19
BUD20YLR074C TY1B-MR2Q04670 1755 aaKnown RBP13.86□□□□□ -0.19
BUD20YLR074C TY1B-LR1Q12088 1755 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms