Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN20P56880 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L13-201ENST00000554103 1267 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L15-201ENST00000611059 1267 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L23-201ENST00000615195 1269 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L24-201ENST00000617576 1269 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L22-201ENST00000618238 1269 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L20-201ENST00000619712 1269 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L21-201ENST00000622058 1269 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L10-201ENST00000622460 1267 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 CR559946.2-201ENST00000623684 991 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 DUX4L25-201ENST00000624915 1269 ntBASIC23.14■■□□□ 1.29
CLDN20P56880 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.14■■□□□ 1.29
CLDN20P56880 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN20P56880 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN20P56880 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN20P56880 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.13■■□□□ 1.29
CLDN20P56880 MIR3648-2-201ENST00000581792 180 ntBASIC23.13■■□□□ 1.29
CLDN20P56880 MIR3648-1-201ENST00000615959 180 ntBASIC23.13■■□□□ 1.29
CLDN20P56880 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.13■■□□□ 1.29
CLDN20P56880 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN20P56880 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN20P56880 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN20P56880 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN20P56880 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN20P56880 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN20P56880 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN20P56880 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CLDN20P56880 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.11■■□□□ 1.29
CLDN20P56880 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.11■■□□□ 1.29
CLDN20P56880 AC016575.1-201ENST00000607026 382 ntBASIC23.11■■□□□ 1.29
CLDN20P56880 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN20P56880 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN20P56880 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.1■■□□□ 1.29
CLDN20P56880 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN20P56880 HLA-V-202ENST00000446817 847 ntBASIC23.1■■□□□ 1.29
CLDN20P56880 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CLDN20P56880 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLDN20P56880 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.09■■□□□ 1.29
CLDN20P56880 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CLDN20P56880 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN20P56880 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.09■■□□□ 1.29
CLDN20P56880 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN20P56880 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLDN20P56880 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.09■■□□□ 1.29
CLDN20P56880 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.08■■□□□ 1.29
CLDN20P56880 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.08■■□□□ 1.29
CLDN20P56880 AP004833.2-201ENST00000532228 1454 ntBASIC23.08■■□□□ 1.29
CLDN20P56880 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLDN20P56880 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN20P56880 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CLDN20P56880 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CLDN20P56880 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLDN20P56880 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN20P56880 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN20P56880 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN20P56880 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN20P56880 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.06■■□□□ 1.28
CLDN20P56880 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLDN20P56880 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.05■■□□□ 1.28
CLDN20P56880 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLDN20P56880 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLDN20P56880 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.04■■□□□ 1.28
CLDN20P56880 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.04■■□□□ 1.28
CLDN20P56880 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.04■■□□□ 1.28
CLDN20P56880 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.04■■□□□ 1.28
CLDN20P56880 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.04■■□□□ 1.28
CLDN20P56880 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN20P56880 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN20P56880 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLDN20P56880 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.03■■□□□ 1.28
CLDN20P56880 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN20P56880 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.02■■□□□ 1.28
CLDN20P56880 AC100797.4-201ENST00000631653 1827 ntBASIC23.02■■□□□ 1.28
CLDN20P56880 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN20P56880 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN20P56880 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.01■■□□□ 1.27
CLDN20P56880 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.01■■□□□ 1.27
CLDN20P56880 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23■■□□□ 1.27
CLDN20P56880 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23■■□□□ 1.27
CLDN20P56880 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN20P56880 MIR639-201ENST00000384974 98 ntBASIC23■■□□□ 1.27
CLDN20P56880 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23■■□□□ 1.27
CLDN20P56880 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLDN20P56880 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.99■■□□□ 1.27
CLDN20P56880 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN20P56880 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN20P56880 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CLDN20P56880 AL121749.1-202ENST00000609313 2153 ntBASIC22.99■■□□□ 1.27
CLDN20P56880 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN20P56880 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN20P56880 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms