Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
MMP13P45452 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.29■■□□□ 1.8
MMP13P45452 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
MMP13P45452 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.29■■□□□ 1.8
MMP13P45452 AP004833.2-201ENST00000532228 1454 ntBASIC26.29■■□□□ 1.8
MMP13P45452 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP13P45452 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP13P45452 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
MMP13P45452 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
MMP13P45452 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.28■■□□□ 1.8
MMP13P45452 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 LINC00273-201ENST00000539813 1452 ntBASIC26.27■■□□□ 1.8
MMP13P45452 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
MMP13P45452 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.26■■□□□ 1.79
MMP13P45452 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.26■■□□□ 1.79
MMP13P45452 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
MMP13P45452 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.26■■□□□ 1.79
MMP13P45452 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.26■■□□□ 1.79
MMP13P45452 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.26■■□□□ 1.79
MMP13P45452 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
MMP13P45452 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP13P45452 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MMP13P45452 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
MMP13P45452 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
MMP13P45452 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.24■■□□□ 1.79
MMP13P45452 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.24■■□□□ 1.79
MMP13P45452 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.24■■□□□ 1.79
MMP13P45452 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP13P45452 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MMP13P45452 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MMP13P45452 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
MMP13P45452 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
MMP13P45452 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
MMP13P45452 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP13P45452 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP13P45452 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.22■■□□□ 1.79
MMP13P45452 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MMP13P45452 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
MMP13P45452 AC135983.2-203ENST00000454486 1613 ntBASIC26.21■■□□□ 1.79
MMP13P45452 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP13P45452 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP13P45452 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MMP13P45452 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
MMP13P45452 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
MMP13P45452 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
MMP13P45452 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MMP13P45452 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
MMP13P45452 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.19■■□□□ 1.78
MMP13P45452 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
MMP13P45452 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MMP13P45452 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.19■■□□□ 1.78
MMP13P45452 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
MMP13P45452 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.19■■□□□ 1.78
MMP13P45452 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
MMP13P45452 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.18■■□□□ 1.78
MMP13P45452 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.18■■□□□ 1.78
MMP13P45452 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MMP13P45452 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
MMP13P45452 WHAMMP2-203ENST00000563942 1603 ntBASIC26.17■■□□□ 1.78
MMP13P45452 BX255925.1-201ENST00000566954 1854 ntBASIC26.17■■□□□ 1.78
MMP13P45452 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
MMP13P45452 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
MMP13P45452 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
MMP13P45452 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
MMP13P45452 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.16■■□□□ 1.78
MMP13P45452 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
MMP13P45452 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MMP13P45452 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.16■■□□□ 1.78
MMP13P45452 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
MMP13P45452 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
MMP13P45452 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
MMP13P45452 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
MMP13P45452 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
MMP13P45452 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.12■■□□□ 1.77
MMP13P45452 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.12■■□□□ 1.77
MMP13P45452 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP13P45452 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.12■■□□□ 1.77
MMP13P45452 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP13P45452 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.12■■□□□ 1.77
MMP13P45452 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MMP13P45452 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MMP13P45452 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MMP13P45452 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.1■■□□□ 1.77
MMP13P45452 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms