Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
UBCP0CG48 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.16■■□□□ 1.14
UBCP0CG48 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.15■■□□□ 1.14
UBCP0CG48 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
UBCP0CG48 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBCP0CG48 AC005559.1-201ENST00000589661 871 ntBASIC22.15■■□□□ 1.14
UBCP0CG48 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBCP0CG48 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
UBCP0CG48 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.15■■□□□ 1.14
UBCP0CG48 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
UBCP0CG48 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
UBCP0CG48 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
UBCP0CG48 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
UBCP0CG48 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.14■■□□□ 1.13
UBCP0CG48 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
UBCP0CG48 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
UBCP0CG48 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.13■■□□□ 1.13
UBCP0CG48 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
UBCP0CG48 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.13■■□□□ 1.13
UBCP0CG48 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.13■■□□□ 1.13
UBCP0CG48 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.12■■□□□ 1.13
UBCP0CG48 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBCP0CG48 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
UBCP0CG48 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBCP0CG48 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBCP0CG48 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.1■■□□□ 1.13
UBCP0CG48 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBCP0CG48 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBCP0CG48 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBCP0CG48 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBCP0CG48 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBCP0CG48 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBCP0CG48 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
UBCP0CG48 AC108673.1-201ENST00000510422 1159 ntBASIC22.09■■□□□ 1.13
UBCP0CG48 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBCP0CG48 AC135983.2-203ENST00000454486 1613 ntBASIC22.09■■□□□ 1.13
UBCP0CG48 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
UBCP0CG48 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UBCP0CG48 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
UBCP0CG48 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.08■■□□□ 1.13
UBCP0CG48 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
UBCP0CG48 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
UBCP0CG48 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBCP0CG48 SUZ12P1-203ENST00000578195 985 ntBASIC22.07■■□□□ 1.12
UBCP0CG48 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBCP0CG48 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.07■■□□□ 1.12
UBCP0CG48 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
UBCP0CG48 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBCP0CG48 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBCP0CG48 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.06■■□□□ 1.12
UBCP0CG48 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBCP0CG48 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBCP0CG48 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
UBCP0CG48 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.06■■□□□ 1.12
UBCP0CG48 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBCP0CG48 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.05■■□□□ 1.12
UBCP0CG48 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.05■■□□□ 1.12
UBCP0CG48 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBCP0CG48 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.05■■□□□ 1.12
UBCP0CG48 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBCP0CG48 AC018358.1-201ENST00000631079 1402 ntBASIC22.05■■□□□ 1.12
UBCP0CG48 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
UBCP0CG48 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBCP0CG48 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBCP0CG48 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBCP0CG48 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBCP0CG48 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBCP0CG48 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBCP0CG48 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBCP0CG48 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBCP0CG48 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
UBCP0CG48 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
UBCP0CG48 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.02■■□□□ 1.12
UBCP0CG48 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.02■■□□□ 1.12
UBCP0CG48 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
UBCP0CG48 WHAMMP2-203ENST00000563942 1603 ntBASIC22.02■■□□□ 1.11
UBCP0CG48 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.02■■□□□ 1.11
UBCP0CG48 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.02■■□□□ 1.11
UBCP0CG48 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.01■■□□□ 1.11
UBCP0CG48 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBCP0CG48 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
UBCP0CG48 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBCP0CG48 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.01■■□□□ 1.11
UBCP0CG48 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22■■□□□ 1.11
UBCP0CG48 LINC00273-201ENST00000539813 1452 ntBASIC22■■□□□ 1.11
UBCP0CG48 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UBCP0CG48 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
UBCP0CG48 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBCP0CG48 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBCP0CG48 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBCP0CG48 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBCP0CG48 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.98■■□□□ 1.11
UBCP0CG48 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UBCP0CG48 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBCP0CG48 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
UBCP0CG48 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
UBCP0CG48 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBCP0CG48 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBCP0CG48 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.97■■□□□ 1.11
UBCP0CG48 MIR6090-201ENST00000622481 60 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms