Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CD48P09326 BX255925.1-201ENST00000566954 1854 ntBASIC26.4■■□□□ 1.82
CD48P09326 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CD48P09326 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.4■■□□□ 1.82
CD48P09326 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CD48P09326 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CD48P09326 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.39■■□□□ 1.82
CD48P09326 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CD48P09326 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.38■■□□□ 1.81
CD48P09326 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD48P09326 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD48P09326 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD48P09326 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD48P09326 LINC01003-201ENST00000564834 1764 ntBASIC26.37■■□□□ 1.81
CD48P09326 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.37■■□□□ 1.81
CD48P09326 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CD48P09326 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CD48P09326 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CD48P09326 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CD48P09326 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CD48P09326 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CD48P09326 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.36■■□□□ 1.81
CD48P09326 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.36■■□□□ 1.81
CD48P09326 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CD48P09326 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CD48P09326 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CD48P09326 DUX4L29-201ENST00000425409 679 ntBASIC26.35■■□□□ 1.81
CD48P09326 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD48P09326 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CD48P09326 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.33■■□□□ 1.81
CD48P09326 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CD48P09326 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
CD48P09326 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CD48P09326 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.32■■□□□ 1.8
CD48P09326 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.32■■□□□ 1.8
CD48P09326 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CD48P09326 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CD48P09326 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CD48P09326 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CD48P09326 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.31■■□□□ 1.8
CD48P09326 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.31■■□□□ 1.8
CD48P09326 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CD48P09326 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.3■■□□□ 1.8
CD48P09326 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CD48P09326 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD48P09326 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CD48P09326 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD48P09326 AL121749.1-202ENST00000609313 2153 ntBASIC26.29■■□□□ 1.8
CD48P09326 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CD48P09326 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CD48P09326 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.28■■□□□ 1.8
CD48P09326 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CD48P09326 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CD48P09326 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CD48P09326 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CD48P09326 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.25■■□□□ 1.79
CD48P09326 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CD48P09326 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CD48P09326 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CD48P09326 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CD48P09326 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.24■■□□□ 1.79
CD48P09326 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
CD48P09326 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CD48P09326 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CD48P09326 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CD48P09326 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD48P09326 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CD48P09326 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.22■■□□□ 1.79
CD48P09326 AC018358.1-201ENST00000631079 1402 ntBASIC26.22■■□□□ 1.79
CD48P09326 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD48P09326 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD48P09326 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.21■■□□□ 1.79
CD48P09326 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.21■■□□□ 1.79
CD48P09326 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CD48P09326 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CD48P09326 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CD48P09326 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
CD48P09326 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CD48P09326 AC110285.7-201ENST00000624417 1536 ntBASIC26.2■■□□□ 1.79
CD48P09326 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.2■■□□□ 1.79
CD48P09326 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CD48P09326 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CD48P09326 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.2■■□□□ 1.78
CD48P09326 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CD48P09326 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CD48P09326 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CD48P09326 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD48P09326 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CD48P09326 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CD48P09326 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CD48P09326 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.18■■□□□ 1.78
CD48P09326 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
CD48P09326 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.17■■□□□ 1.78
CD48P09326 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.17■■□□□ 1.78
CD48P09326 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CD48P09326 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CD48P09326 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CD48P09326 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CD48P09326 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.16■■□□□ 1.78
CD48P09326 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms