Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MRPL3P09001 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.68■■□□□ 1.22
MRPL3P09001 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.67■■□□□ 1.22
MRPL3P09001 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
MRPL3P09001 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.66■■□□□ 1.22
MRPL3P09001 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL3P09001 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL3P09001 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MRPL3P09001 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.66■■□□□ 1.22
MRPL3P09001 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL3P09001 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
MRPL3P09001 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
MRPL3P09001 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.64■■□□□ 1.22
MRPL3P09001 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
MRPL3P09001 MIR762-201ENST00000390236 83 ntBASIC22.64■■□□□ 1.21
MRPL3P09001 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MRPL3P09001 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MRPL3P09001 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
MRPL3P09001 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MRPL3P09001 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MRPL3P09001 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MRPL3P09001 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
MRPL3P09001 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
MRPL3P09001 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MRPL3P09001 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.61■■□□□ 1.21
MRPL3P09001 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.61■■□□□ 1.21
MRPL3P09001 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
MRPL3P09001 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.61■■□□□ 1.21
MRPL3P09001 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.61■■□□□ 1.21
MRPL3P09001 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.61■■□□□ 1.21
MRPL3P09001 AP002414.2-202ENST00000590929 1450 ntBASIC22.6■■□□□ 1.21
MRPL3P09001 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.6■■□□□ 1.21
MRPL3P09001 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
MRPL3P09001 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.6■■□□□ 1.21
MRPL3P09001 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
MRPL3P09001 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.59■■□□□ 1.21
MRPL3P09001 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
MRPL3P09001 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MRPL3P09001 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
MRPL3P09001 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MRPL3P09001 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
MRPL3P09001 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.59■■□□□ 1.21
MRPL3P09001 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
MRPL3P09001 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
MRPL3P09001 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.58■■□□□ 1.21
MRPL3P09001 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.57■■□□□ 1.2
MRPL3P09001 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MRPL3P09001 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.57■■□□□ 1.2
MRPL3P09001 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
MRPL3P09001 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
MRPL3P09001 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MRPL3P09001 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MRPL3P09001 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
MRPL3P09001 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.56■■□□□ 1.2
MRPL3P09001 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
MRPL3P09001 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.56■■□□□ 1.2
MRPL3P09001 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MRPL3P09001 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.55■■□□□ 1.2
MRPL3P09001 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MRPL3P09001 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MRPL3P09001 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MRPL3P09001 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.54■■□□□ 1.2
MRPL3P09001 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.54■■□□□ 1.2
MRPL3P09001 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.54■■□□□ 1.2
MRPL3P09001 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
MRPL3P09001 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
MRPL3P09001 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MRPL3P09001 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.52■■□□□ 1.2
MRPL3P09001 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MRPL3P09001 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.51■■□□□ 1.19
MRPL3P09001 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
MRPL3P09001 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.51■■□□□ 1.19
MRPL3P09001 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MRPL3P09001 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.51■■□□□ 1.19
MRPL3P09001 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.51■■□□□ 1.19
MRPL3P09001 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
MRPL3P09001 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
MRPL3P09001 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MRPL3P09001 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MRPL3P09001 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MRPL3P09001 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MRPL3P09001 AC135983.2-203ENST00000454486 1613 ntBASIC22.49■■□□□ 1.19
MRPL3P09001 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MRPL3P09001 AL449106.1-201ENST00000608517 1980 ntBASIC22.49■■□□□ 1.19
MRPL3P09001 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MRPL3P09001 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MRPL3P09001 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MRPL3P09001 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
MRPL3P09001 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.48■■□□□ 1.19
MRPL3P09001 AC005559.1-201ENST00000589661 871 ntBASIC22.48■■□□□ 1.19
MRPL3P09001 WHAMMP2-203ENST00000563942 1603 ntBASIC22.48■■□□□ 1.19
MRPL3P09001 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MRPL3P09001 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MRPL3P09001 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MRPL3P09001 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MRPL3P09001 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MRPL3P09001 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MRPL3P09001 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
MRPL3P09001 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
MRPL3P09001 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms