Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 AP004833.2-201ENST00000532228 1454 ntBASIC21.65■■□□□ 1.06
TCRBP04435 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TCRBP04435 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TCRBP04435 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TCRBP04435 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TCRBP04435 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBP04435 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBP04435 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.64■■□□□ 1.05
TCRBP04435 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBP04435 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBP04435 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TCRBP04435 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBP04435 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBP04435 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TCRBP04435 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBP04435 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.63■■□□□ 1.05
TCRBP04435 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TCRBP04435 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBP04435 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.62■■□□□ 1.05
TCRBP04435 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBP04435 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TCRBP04435 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.61■■□□□ 1.05
TCRBP04435 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBP04435 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.61■■□□□ 1.05
TCRBP04435 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBP04435 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBP04435 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBP04435 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBP04435 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBP04435 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TCRBP04435 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBP04435 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBP04435 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBP04435 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBP04435 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.58■■□□□ 1.05
TCRBP04435 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBP04435 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBP04435 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBP04435 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBP04435 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.57■■□□□ 1.04
TCRBP04435 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
TCRBP04435 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBP04435 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBP04435 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
TCRBP04435 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.55■■□□□ 1.04
TCRBP04435 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBP04435 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBP04435 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.54■■□□□ 1.04
TCRBP04435 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBP04435 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBP04435 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.54■■□□□ 1.04
TCRBP04435 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBP04435 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBP04435 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TCRBP04435 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBP04435 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBP04435 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBP04435 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBP04435 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBP04435 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBP04435 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.52■■□□□ 1.04
TCRBP04435 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBP04435 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TCRBP04435 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TCRBP04435 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
TCRBP04435 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBP04435 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBP04435 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBP04435 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.5■■□□□ 1.03
TCRBP04435 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBP04435 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBP04435 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBP04435 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBP04435 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBP04435 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBP04435 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TCRBP04435 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBP04435 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.48■■□□□ 1.03
TCRBP04435 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.48■■□□□ 1.03
TCRBP04435 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBP04435 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBP04435 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBP04435 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBP04435 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.47■■□□□ 1.03
TCRBP04435 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBP04435 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBP04435 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBP04435 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TCRBP04435 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.46■■□□□ 1.03
TCRBP04435 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBP04435 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBP04435 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.45■■□□□ 1.02
TCRBP04435 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.45■■□□□ 1.02
TCRBP04435 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
TCRBP04435 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TCRBP04435 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBP04435 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBP04435 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.44■■□□□ 1.02
TCRBP04435 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TCRBP04435 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms