Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND1P03886 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
MT-ND1P03886 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND1P03886 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MT-ND1P03886 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
MT-ND1P03886 AC100797.4-201ENST00000631653 1827 ntBASIC23.82■■□□□ 1.4
MT-ND1P03886 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MT-ND1P03886 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.81■■□□□ 1.4
MT-ND1P03886 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
MT-ND1P03886 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND1P03886 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.8■■□□□ 1.4
MT-ND1P03886 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND1P03886 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MT-ND1P03886 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.8■■□□□ 1.4
MT-ND1P03886 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.8■■□□□ 1.4
MT-ND1P03886 AC136428.2-201ENST00000563187 214 ntBASIC23.8■■□□□ 1.4
MT-ND1P03886 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MT-ND1P03886 CAHM-201ENST00000604200 896 ntBASIC23.79■■□□□ 1.4
MT-ND1P03886 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MT-ND1P03886 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.79■■□□□ 1.4
MT-ND1P03886 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND1P03886 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
MT-ND1P03886 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND1P03886 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND1P03886 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MT-ND1P03886 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
MT-ND1P03886 AC097358.2-201ENST00000607541 1159 ntBASIC23.78■■□□□ 1.4
MT-ND1P03886 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.77■■□□□ 1.4
MT-ND1P03886 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MT-ND1P03886 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-ND1P03886 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
MT-ND1P03886 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND1P03886 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND1P03886 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND1P03886 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND1P03886 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND1P03886 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-ND1P03886 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND1P03886 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.74■■□□□ 1.39
MT-ND1P03886 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND1P03886 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND1P03886 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.74■■□□□ 1.39
MT-ND1P03886 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-ND1P03886 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
MT-ND1P03886 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND1P03886 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND1P03886 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND1P03886 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-ND1P03886 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.72■■□□□ 1.39
MT-ND1P03886 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MT-ND1P03886 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MT-ND1P03886 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
MT-ND1P03886 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
MT-ND1P03886 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND1P03886 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
MT-ND1P03886 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND1P03886 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-ND1P03886 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-ND1P03886 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-ND1P03886 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND1P03886 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-ND1P03886 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
MT-ND1P03886 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND1P03886 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND1P03886 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND1P03886 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
MT-ND1P03886 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MT-ND1P03886 AC091060.1-201ENST00000623524 1766 ntBASIC23.68■■□□□ 1.38
MT-ND1P03886 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-ND1P03886 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-ND1P03886 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
MT-ND1P03886 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-ND1P03886 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
MT-ND1P03886 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.64■■□□□ 1.38
MT-ND1P03886 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
MT-ND1P03886 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.64■■□□□ 1.37
MT-ND1P03886 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
MT-ND1P03886 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
MT-ND1P03886 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
MT-ND1P03886 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-ND1P03886 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.62■■□□□ 1.37
MT-ND1P03886 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-ND1P03886 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND1P03886 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND1P03886 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND1P03886 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND1P03886 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND1P03886 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
MT-ND1P03886 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-ND1P03886 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
MT-ND1P03886 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND1P03886 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.6■■□□□ 1.37
MT-ND1P03886 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.6■■□□□ 1.37
MT-ND1P03886 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND1P03886 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-ND1P03886 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MT-ND1P03886 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
MT-ND1P03886 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MT-ND1P03886 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-ND1P03886 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms