Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.88■□□□□ 0.77
SCGB2A1O75556 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCGB2A1O75556 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.88■□□□□ 0.77
SCGB2A1O75556 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCGB2A1O75556 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCGB2A1O75556 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SCGB2A1O75556 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.88■□□□□ 0.77
SCGB2A1O75556 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SCGB2A1O75556 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.87■□□□□ 0.77
SCGB2A1O75556 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCGB2A1O75556 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SCGB2A1O75556 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCGB2A1O75556 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.87■□□□□ 0.77
SCGB2A1O75556 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.86■□□□□ 0.77
SCGB2A1O75556 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SCGB2A1O75556 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCGB2A1O75556 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.85■□□□□ 0.77
SCGB2A1O75556 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCGB2A1O75556 BX255925.1-201ENST00000566954 1854 ntBASIC19.85■□□□□ 0.77
SCGB2A1O75556 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SCGB2A1O75556 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCGB2A1O75556 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCGB2A1O75556 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCGB2A1O75556 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SCGB2A1O75556 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SCGB2A1O75556 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCGB2A1O75556 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SCGB2A1O75556 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SCGB2A1O75556 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SCGB2A1O75556 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCGB2A1O75556 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SCGB2A1O75556 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SCGB2A1O75556 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCGB2A1O75556 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SCGB2A1O75556 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCGB2A1O75556 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCGB2A1O75556 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCGB2A1O75556 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCGB2A1O75556 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCGB2A1O75556 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCGB2A1O75556 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCGB2A1O75556 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.81■□□□□ 0.76
SCGB2A1O75556 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCGB2A1O75556 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCGB2A1O75556 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCGB2A1O75556 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCGB2A1O75556 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.8■□□□□ 0.76
SCGB2A1O75556 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCGB2A1O75556 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCGB2A1O75556 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.79■□□□□ 0.76
SCGB2A1O75556 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.79■□□□□ 0.76
SCGB2A1O75556 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.79■□□□□ 0.76
SCGB2A1O75556 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCGB2A1O75556 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.79■□□□□ 0.76
SCGB2A1O75556 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCGB2A1O75556 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCGB2A1O75556 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCGB2A1O75556 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SCGB2A1O75556 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCGB2A1O75556 AP002414.2-202ENST00000590929 1450 ntBASIC19.78■□□□□ 0.76
SCGB2A1O75556 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCGB2A1O75556 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCGB2A1O75556 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCGB2A1O75556 AC100797.4-201ENST00000631653 1827 ntBASIC19.77■□□□□ 0.76
SCGB2A1O75556 DUX4L28-201ENST00000623687 678 ntBASIC19.77■□□□□ 0.76
SCGB2A1O75556 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCGB2A1O75556 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCGB2A1O75556 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCGB2A1O75556 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SCGB2A1O75556 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.76■□□□□ 0.75
SCGB2A1O75556 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.76■□□□□ 0.75
SCGB2A1O75556 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCGB2A1O75556 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.76■□□□□ 0.75
SCGB2A1O75556 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCGB2A1O75556 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCGB2A1O75556 LINC00273-201ENST00000539813 1452 ntBASIC19.75■□□□□ 0.75
SCGB2A1O75556 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.75■□□□□ 0.75
SCGB2A1O75556 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCGB2A1O75556 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCGB2A1O75556 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.75■□□□□ 0.75
SCGB2A1O75556 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SCGB2A1O75556 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCGB2A1O75556 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SCGB2A1O75556 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCGB2A1O75556 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SCGB2A1O75556 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.74■□□□□ 0.75
SCGB2A1O75556 AC044849.2-201ENST00000606596 710 ntBASIC19.74■□□□□ 0.75
SCGB2A1O75556 LINC01003-201ENST00000564834 1764 ntBASIC19.74■□□□□ 0.75
SCGB2A1O75556 AC135983.2-203ENST00000454486 1613 ntBASIC19.73■□□□□ 0.75
SCGB2A1O75556 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCGB2A1O75556 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCGB2A1O75556 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.73■□□□□ 0.75
SCGB2A1O75556 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.73■□□□□ 0.75
SCGB2A1O75556 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.73■□□□□ 0.75
SCGB2A1O75556 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCGB2A1O75556 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCGB2A1O75556 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.73■□□□□ 0.75
SCGB2A1O75556 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCGB2A1O75556 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCGB2A1O75556 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms