Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22■■□□□ 1.11
XRCC2O43543 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
XRCC2O43543 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
XRCC2O43543 DUX4L29-201ENST00000425409 679 ntBASIC21.99■■□□□ 1.11
XRCC2O43543 BX255925.1-201ENST00000566954 1854 ntBASIC21.98■■□□□ 1.11
XRCC2O43543 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.98■■□□□ 1.11
XRCC2O43543 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
XRCC2O43543 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
XRCC2O43543 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRCC2O43543 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRCC2O43543 RPS2P35-201ENST00000443417 897 ntBASIC21.96■■□□□ 1.11
XRCC2O43543 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
XRCC2O43543 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRCC2O43543 AC021231.2-201ENST00000594613 730 ntBASIC21.95■■□□□ 1.1
XRCC2O43543 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRCC2O43543 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.94■■□□□ 1.1
XRCC2O43543 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC2O43543 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC2O43543 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC2O43543 LINC01003-201ENST00000564834 1764 ntBASIC21.93■■□□□ 1.1
XRCC2O43543 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC2O43543 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC2O43543 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
XRCC2O43543 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.92■■□□□ 1.1
XRCC2O43543 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC2O43543 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.91■■□□□ 1.1
XRCC2O43543 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
XRCC2O43543 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.91■■□□□ 1.1
XRCC2O43543 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.91■■□□□ 1.1
XRCC2O43543 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC2O43543 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.89■■□□□ 1.09
XRCC2O43543 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC2O43543 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC2O43543 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC2O43543 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC2O43543 AC018358.1-201ENST00000631079 1402 ntBASIC21.88■■□□□ 1.09
XRCC2O43543 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.87■■□□□ 1.09
XRCC2O43543 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.87■■□□□ 1.09
XRCC2O43543 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.87■■□□□ 1.09
XRCC2O43543 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
XRCC2O43543 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.86■■□□□ 1.09
XRCC2O43543 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
XRCC2O43543 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRCC2O43543 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
XRCC2O43543 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
XRCC2O43543 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.84■■□□□ 1.09
XRCC2O43543 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.84■■□□□ 1.09
XRCC2O43543 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
XRCC2O43543 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRCC2O43543 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
XRCC2O43543 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.83■■□□□ 1.09
XRCC2O43543 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
XRCC2O43543 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.82■■□□□ 1.08
XRCC2O43543 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
XRCC2O43543 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRCC2O43543 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
XRCC2O43543 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
XRCC2O43543 AC110285.7-201ENST00000624417 1536 ntBASIC21.81■■□□□ 1.08
XRCC2O43543 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
XRCC2O43543 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
XRCC2O43543 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRCC2O43543 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.8■■□□□ 1.08
XRCC2O43543 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
XRCC2O43543 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
XRCC2O43543 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.78■■□□□ 1.08
XRCC2O43543 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.78■■□□□ 1.08
XRCC2O43543 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
XRCC2O43543 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
XRCC2O43543 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms