Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22■■□□□ 1.11
XRCC2O43543 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
XRCC2O43543 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
XRCC2O43543 DUX4L29-201ENST00000425409 679 ntBASIC21.99■■□□□ 1.11
XRCC2O43543 BX255925.1-201ENST00000566954 1854 ntBASIC21.98■■□□□ 1.11
XRCC2O43543 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.98■■□□□ 1.11
XRCC2O43543 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
XRCC2O43543 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
XRCC2O43543 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
XRCC2O43543 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRCC2O43543 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRCC2O43543 RPS2P35-201ENST00000443417 897 ntBASIC21.96■■□□□ 1.11
XRCC2O43543 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
XRCC2O43543 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRCC2O43543 AC021231.2-201ENST00000594613 730 ntBASIC21.95■■□□□ 1.1
XRCC2O43543 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRCC2O43543 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRCC2O43543 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.94■■□□□ 1.1
XRCC2O43543 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC2O43543 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC2O43543 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRCC2O43543 LINC01003-201ENST00000564834 1764 ntBASIC21.93■■□□□ 1.1
XRCC2O43543 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC2O43543 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
XRCC2O43543 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
XRCC2O43543 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.92■■□□□ 1.1
XRCC2O43543 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
XRCC2O43543 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.91■■□□□ 1.1
XRCC2O43543 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
XRCC2O43543 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.91■■□□□ 1.1
XRCC2O43543 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.91■■□□□ 1.1
XRCC2O43543 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
XRCC2O43543 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC2O43543 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.89■■□□□ 1.09
XRCC2O43543 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
XRCC2O43543 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC2O43543 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC2O43543 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
XRCC2O43543 AC018358.1-201ENST00000631079 1402 ntBASIC21.88■■□□□ 1.09
XRCC2O43543 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.87■■□□□ 1.09
XRCC2O43543 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.87■■□□□ 1.09
XRCC2O43543 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.87■■□□□ 1.09
XRCC2O43543 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
XRCC2O43543 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
XRCC2O43543 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.86■■□□□ 1.09
XRCC2O43543 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
XRCC2O43543 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
XRCC2O43543 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
XRCC2O43543 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
XRCC2O43543 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.84■■□□□ 1.09
XRCC2O43543 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
XRCC2O43543 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.84■■□□□ 1.09
XRCC2O43543 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
XRCC2O43543 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
XRCC2O43543 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
XRCC2O43543 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.83■■□□□ 1.09
XRCC2O43543 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
XRCC2O43543 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.82■■□□□ 1.08
XRCC2O43543 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
XRCC2O43543 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
XRCC2O43543 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
XRCC2O43543 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
XRCC2O43543 AC110285.7-201ENST00000624417 1536 ntBASIC21.81■■□□□ 1.08
XRCC2O43543 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
XRCC2O43543 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
XRCC2O43543 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
XRCC2O43543 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.8■■□□□ 1.08
XRCC2O43543 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
XRCC2O43543 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
XRCC2O43543 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
XRCC2O43543 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
XRCC2O43543 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.78■■□□□ 1.08
XRCC2O43543 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.78■■□□□ 1.08
XRCC2O43543 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
XRCC2O43543 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
XRCC2O43543 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms