Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.42■■□□□ 1.34
TNFRSF11BO00300 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.42■■□□□ 1.34
TNFRSF11BO00300 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
TNFRSF11BO00300 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TNFRSF11BO00300 AL391121.1-201ENST00000607967 1349 ntBASIC23.41■■□□□ 1.34
TNFRSF11BO00300 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF11BO00300 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TNFRSF11BO00300 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.41■■□□□ 1.34
TNFRSF11BO00300 AP002414.2-202ENST00000590929 1450 ntBASIC23.41■■□□□ 1.34
TNFRSF11BO00300 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
TNFRSF11BO00300 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11BO00300 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TNFRSF11BO00300 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TNFRSF11BO00300 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11BO00300 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11BO00300 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11BO00300 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11BO00300 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TNFRSF11BO00300 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.36■■□□□ 1.33
TNFRSF11BO00300 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
TNFRSF11BO00300 AL449106.1-201ENST00000608517 1980 ntBASIC23.36■■□□□ 1.33
TNFRSF11BO00300 AC135731.1-201ENST00000569415 2548 ntBASIC23.36■■□□□ 1.33
TNFRSF11BO00300 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11BO00300 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11BO00300 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11BO00300 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11BO00300 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11BO00300 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TNFRSF11BO00300 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11BO00300 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11BO00300 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TNFRSF11BO00300 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11BO00300 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11BO00300 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11BO00300 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11BO00300 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TNFRSF11BO00300 CAHM-201ENST00000604200 896 ntBASIC23.33■■□□□ 1.33
TNFRSF11BO00300 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.33■■□□□ 1.32
TNFRSF11BO00300 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.33■■□□□ 1.32
TNFRSF11BO00300 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
TNFRSF11BO00300 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TNFRSF11BO00300 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11BO00300 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11BO00300 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11BO00300 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TNFRSF11BO00300 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFRSF11BO00300 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TNFRSF11BO00300 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TNFRSF11BO00300 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.29■■□□□ 1.32
TNFRSF11BO00300 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFRSF11BO00300 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TNFRSF11BO00300 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
TNFRSF11BO00300 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.29■■□□□ 1.32
TNFRSF11BO00300 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TNFRSF11BO00300 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TNFRSF11BO00300 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNFRSF11BO00300 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TNFRSF11BO00300 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFRSF11BO00300 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TNFRSF11BO00300 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TNFRSF11BO00300 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TNFRSF11BO00300 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TNFRSF11BO00300 AC091060.1-201ENST00000623524 1766 ntBASIC23.24■■□□□ 1.31
TNFRSF11BO00300 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 AC018358.1-201ENST00000631079 1402 ntBASIC23.24■■□□□ 1.31
TNFRSF11BO00300 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF11BO00300 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.23■■□□□ 1.31
TNFRSF11BO00300 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.23■■□□□ 1.31
TNFRSF11BO00300 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TNFRSF11BO00300 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
TNFRSF11BO00300 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.2■■□□□ 1.3
TNFRSF11BO00300 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.2■■□□□ 1.3
TNFRSF11BO00300 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF11BO00300 AC136428.2-201ENST00000563187 214 ntBASIC23.2■■□□□ 1.3
TNFRSF11BO00300 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.2■■□□□ 1.3
TNFRSF11BO00300 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11BO00300 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TNFRSF11BO00300 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11BO00300 AC097358.2-201ENST00000607541 1159 ntBASIC23.19■■□□□ 1.3
TNFRSF11BO00300 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF11BO00300 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TNFRSF11BO00300 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TNFRSF11BO00300 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms