Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00473A8K010 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00473A8K010 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00473A8K010 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00473A8K010 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00473A8K010 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 WHAMMP2-203ENST00000563942 1603 ntBASIC20.69■□□□□ 0.9
LINC00473A8K010 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00473A8K010 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00473A8K010 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00473A8K010 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00473A8K010 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00473A8K010 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
LINC00473A8K010 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00473A8K010 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00473A8K010 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00473A8K010 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00473A8K010 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LINC00473A8K010 MIR3665-201ENST00000578708 105 ntBASIC20.65■□□□□ 0.9
LINC00473A8K010 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00473A8K010 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00473A8K010 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00473A8K010 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.64■□□□□ 0.89
LINC00473A8K010 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00473A8K010 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LINC00473A8K010 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00473A8K010 LINC00273-201ENST00000539813 1452 ntBASIC20.63■□□□□ 0.89
LINC00473A8K010 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00473A8K010 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00473A8K010 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LINC00473A8K010 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00473A8K010 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.61■□□□□ 0.89
LINC00473A8K010 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00473A8K010 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00473A8K010 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LINC00473A8K010 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.61■□□□□ 0.89
LINC00473A8K010 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00473A8K010 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
LINC00473A8K010 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINC00473A8K010 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00473A8K010 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LINC00473A8K010 AP006261.1-201ENST00000584783 668 ntBASIC20.59■□□□□ 0.89
LINC00473A8K010 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00473A8K010 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC00473A8K010 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINC00473A8K010 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC00473A8K010 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00473A8K010 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LINC00473A8K010 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00473A8K010 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINC00473A8K010 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC00473A8K010 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.58■□□□□ 0.88
LINC00473A8K010 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
LINC00473A8K010 AC018358.1-201ENST00000631079 1402 ntBASIC20.57■□□□□ 0.88
LINC00473A8K010 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LINC00473A8K010 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC00473A8K010 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINC00473A8K010 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00473A8K010 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC00473A8K010 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC00473A8K010 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC00473A8K010 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC00473A8K010 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC00473A8K010 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC00473A8K010 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LINC00473A8K010 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC00473A8K010 AC087741.3-201ENST00000624270 1347 ntBASIC20.53■□□□□ 0.88
LINC00473A8K010 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00473A8K010 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC00473A8K010 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC00473A8K010 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.52■□□□□ 0.88
LINC00473A8K010 AL162393.1-201ENST00000437852 946 ntBASIC20.51■□□□□ 0.87
LINC00473A8K010 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC00473A8K010 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.51■□□□□ 0.87
LINC00473A8K010 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LINC00473A8K010 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC00473A8K010 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC00473A8K010 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00473A8K010 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms