Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF103-CHMP3A0A140T963 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF103-CHMP3A0A140T963 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF103-CHMP3A0A140T963 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF103-CHMP3A0A140T963 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.19■■□□□ 1.46
RNF103-CHMP3A0A140T963 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF103-CHMP3A0A140T963 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF103-CHMP3A0A140T963 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF103-CHMP3A0A140T963 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RNF103-CHMP3A0A140T963 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF103-CHMP3A0A140T963 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF103-CHMP3A0A140T963 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF103-CHMP3A0A140T963 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.18■■□□□ 1.46
RNF103-CHMP3A0A140T963 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF103-CHMP3A0A140T963 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF103-CHMP3A0A140T963 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF103-CHMP3A0A140T963 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.17■■□□□ 1.46
RNF103-CHMP3A0A140T963 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF103-CHMP3A0A140T963 BX255925.1-201ENST00000566954 1854 ntBASIC24.17■■□□□ 1.46
RNF103-CHMP3A0A140T963 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF103-CHMP3A0A140T963 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF103-CHMP3A0A140T963 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF103-CHMP3A0A140T963 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF103-CHMP3A0A140T963 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF103-CHMP3A0A140T963 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF103-CHMP3A0A140T963 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF103-CHMP3A0A140T963 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF103-CHMP3A0A140T963 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF103-CHMP3A0A140T963 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF103-CHMP3A0A140T963 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.14■■□□□ 1.46
RNF103-CHMP3A0A140T963 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RNF103-CHMP3A0A140T963 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RNF103-CHMP3A0A140T963 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF103-CHMP3A0A140T963 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF103-CHMP3A0A140T963 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF103-CHMP3A0A140T963 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF103-CHMP3A0A140T963 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF103-CHMP3A0A140T963 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF103-CHMP3A0A140T963 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
RNF103-CHMP3A0A140T963 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
RNF103-CHMP3A0A140T963 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF103-CHMP3A0A140T963 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
RNF103-CHMP3A0A140T963 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF103-CHMP3A0A140T963 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF103-CHMP3A0A140T963 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF103-CHMP3A0A140T963 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF103-CHMP3A0A140T963 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RNF103-CHMP3A0A140T963 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF103-CHMP3A0A140T963 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF103-CHMP3A0A140T963 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF103-CHMP3A0A140T963 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF103-CHMP3A0A140T963 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.09■■□□□ 1.45
RNF103-CHMP3A0A140T963 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF103-CHMP3A0A140T963 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF103-CHMP3A0A140T963 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.08■■□□□ 1.45
RNF103-CHMP3A0A140T963 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RNF103-CHMP3A0A140T963 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.08■■□□□ 1.45
RNF103-CHMP3A0A140T963 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF103-CHMP3A0A140T963 DUX4L28-201ENST00000623687 678 ntBASIC24.08■■□□□ 1.45
RNF103-CHMP3A0A140T963 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RNF103-CHMP3A0A140T963 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.08■■□□□ 1.44
RNF103-CHMP3A0A140T963 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF103-CHMP3A0A140T963 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF103-CHMP3A0A140T963 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
RNF103-CHMP3A0A140T963 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RNF103-CHMP3A0A140T963 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 AC100797.4-201ENST00000631653 1827 ntBASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 AC108673.1-201ENST00000510422 1159 ntBASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RNF103-CHMP3A0A140T963 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF103-CHMP3A0A140T963 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RNF103-CHMP3A0A140T963 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RNF103-CHMP3A0A140T963 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF103-CHMP3A0A140T963 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.04■■□□□ 1.44
RNF103-CHMP3A0A140T963 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF103-CHMP3A0A140T963 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.03■■□□□ 1.44
RNF103-CHMP3A0A140T963 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF103-CHMP3A0A140T963 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF103-CHMP3A0A140T963 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF103-CHMP3A0A140T963 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.02■■□□□ 1.43
RNF103-CHMP3A0A140T963 AL449106.1-201ENST00000608517 1980 ntBASIC24.02■■□□□ 1.43
RNF103-CHMP3A0A140T963 MIR3665-201ENST00000578708 105 ntBASIC24.01■■□□□ 1.43
RNF103-CHMP3A0A140T963 MIR6090-201ENST00000622481 60 ntBASIC24.01■■□□□ 1.43
RNF103-CHMP3A0A140T963 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF103-CHMP3A0A140T963 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF103-CHMP3A0A140T963 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF103-CHMP3A0A140T963 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24■■□□□ 1.43
RNF103-CHMP3A0A140T963 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF103-CHMP3A0A140T963 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF103-CHMP3A0A140T963 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms