Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV27A0A0K0K1C4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV27A0A0K0K1C4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV27A0A0K0K1C4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV27A0A0K0K1C4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV27A0A0K0K1C4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV27A0A0K0K1C4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV27A0A0K0K1C4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV27A0A0K0K1C4 AC091060.1-201ENST00000623524 1766 ntBASIC17.92■□□□□ 0.46
TRBV27A0A0K0K1C4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV27A0A0K0K1C4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV27A0A0K0K1C4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRBV27A0A0K0K1C4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.9■□□□□ 0.46
TRBV27A0A0K0K1C4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV27A0A0K0K1C4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV27A0A0K0K1C4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV27A0A0K0K1C4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV27A0A0K0K1C4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV27A0A0K0K1C4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV27A0A0K0K1C4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV27A0A0K0K1C4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV27A0A0K0K1C4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV27A0A0K0K1C4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV27A0A0K0K1C4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV27A0A0K0K1C4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV27A0A0K0K1C4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV27A0A0K0K1C4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV27A0A0K0K1C4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 AC145676.1-201ENST00000514988 2004 ntBASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 AC018358.1-201ENST00000631079 1402 ntBASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV27A0A0K0K1C4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV27A0A0K0K1C4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV27A0A0K0K1C4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRBV27A0A0K0K1C4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV27A0A0K0K1C4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV27A0A0K0K1C4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV27A0A0K0K1C4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV27A0A0K0K1C4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV27A0A0K0K1C4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV27A0A0K0K1C4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV27A0A0K0K1C4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV27A0A0K0K1C4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV27A0A0K0K1C4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV27A0A0K0K1C4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.83■□□□□ 0.45
TRBV27A0A0K0K1C4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRBV27A0A0K0K1C4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TRBV27A0A0K0K1C4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV27A0A0K0K1C4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV27A0A0K0K1C4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV27A0A0K0K1C4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV27A0A0K0K1C4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV27A0A0K0K1C4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV27A0A0K0K1C4 SETD8P1-201ENST00000623146 1180 ntBASIC17.82■□□□□ 0.44
TRBV27A0A0K0K1C4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV27A0A0K0K1C4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV27A0A0K0K1C4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.81■□□□□ 0.44
TRBV27A0A0K0K1C4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV27A0A0K0K1C4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV27A0A0K0K1C4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV27A0A0K0K1C4 RARRES2P7-201ENST00000567349 469 ntBASIC17.8■□□□□ 0.44
TRBV27A0A0K0K1C4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV27A0A0K0K1C4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV27A0A0K0K1C4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV27A0A0K0K1C4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV27A0A0K0K1C4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRBV27A0A0K0K1C4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV27A0A0K0K1C4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV27A0A0K0K1C4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV27A0A0K0K1C4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV27A0A0K0K1C4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV27A0A0K0K1C4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV27A0A0K0K1C4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV27A0A0K0K1C4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV27A0A0K0K1C4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV27A0A0K0K1C4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV27A0A0K0K1C4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms