Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-1A0A0A6YYK1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-1A0A0A6YYK1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-1A0A0A6YYK1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV8-1A0A0A6YYK1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-1A0A0A6YYK1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-1A0A0A6YYK1 RARRES2P7-201ENST00000567349 469 ntBASIC19.2■□□□□ 0.66
TRAV8-1A0A0A6YYK1 SETD8P1-201ENST00000623146 1180 ntBASIC19.2■□□□□ 0.66
TRAV8-1A0A0A6YYK1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV8-1A0A0A6YYK1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV8-1A0A0A6YYK1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-1A0A0A6YYK1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRAV8-1A0A0A6YYK1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV8-1A0A0A6YYK1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-1A0A0A6YYK1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAV8-1A0A0A6YYK1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.17■□□□□ 0.66
TRAV8-1A0A0A6YYK1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV8-1A0A0A6YYK1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV8-1A0A0A6YYK1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-1A0A0A6YYK1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-1A0A0A6YYK1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRAV8-1A0A0A6YYK1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-1A0A0A6YYK1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
TRAV8-1A0A0A6YYK1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV8-1A0A0A6YYK1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-1A0A0A6YYK1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV8-1A0A0A6YYK1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV8-1A0A0A6YYK1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-1A0A0A6YYK1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV8-1A0A0A6YYK1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV8-1A0A0A6YYK1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-1A0A0A6YYK1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-1A0A0A6YYK1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV8-1A0A0A6YYK1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV8-1A0A0A6YYK1 AP002414.2-202ENST00000590929 1450 ntBASIC19.1■□□□□ 0.65
TRAV8-1A0A0A6YYK1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-1A0A0A6YYK1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV8-1A0A0A6YYK1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV8-1A0A0A6YYK1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV8-1A0A0A6YYK1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV8-1A0A0A6YYK1 AL391121.1-201ENST00000607967 1349 ntBASIC19.08■□□□□ 0.65
TRAV8-1A0A0A6YYK1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-1A0A0A6YYK1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV8-1A0A0A6YYK1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV8-1A0A0A6YYK1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV8-1A0A0A6YYK1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV8-1A0A0A6YYK1 AC091060.1-201ENST00000623524 1766 ntBASIC19.06■□□□□ 0.64
TRAV8-1A0A0A6YYK1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-1A0A0A6YYK1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV8-1A0A0A6YYK1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV8-1A0A0A6YYK1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-1A0A0A6YYK1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-1A0A0A6YYK1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV8-1A0A0A6YYK1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-1A0A0A6YYK1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV8-1A0A0A6YYK1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TRAV8-1A0A0A6YYK1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-1A0A0A6YYK1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV8-1A0A0A6YYK1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV8-1A0A0A6YYK1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-1A0A0A6YYK1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV8-1A0A0A6YYK1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-1A0A0A6YYK1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV8-1A0A0A6YYK1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 CAHM-201ENST00000604200 896 ntBASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV8-1A0A0A6YYK1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV8-1A0A0A6YYK1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV8-1A0A0A6YYK1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms