Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV30A0A087WSZ9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV30A0A087WSZ9 LINC01003-201ENST00000564834 1764 ntBASIC19.8■□□□□ 0.76
TRAV30A0A087WSZ9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TRAV30A0A087WSZ9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 AC135983.2-203ENST00000454486 1613 ntBASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 DUX4L28-201ENST00000623687 678 ntBASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV30A0A087WSZ9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.77■□□□□ 0.76
TRAV30A0A087WSZ9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV30A0A087WSZ9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRAV30A0A087WSZ9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV30A0A087WSZ9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV30A0A087WSZ9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 LINC00273-201ENST00000539813 1452 ntBASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 MIR6090-201ENST00000622481 60 ntBASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 AL121749.1-202ENST00000609313 2153 ntBASIC19.75■□□□□ 0.75
TRAV30A0A087WSZ9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV30A0A087WSZ9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV30A0A087WSZ9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV30A0A087WSZ9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAV30A0A087WSZ9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV30A0A087WSZ9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRAV30A0A087WSZ9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV30A0A087WSZ9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV30A0A087WSZ9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV30A0A087WSZ9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.71■□□□□ 0.75
TRAV30A0A087WSZ9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV30A0A087WSZ9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV30A0A087WSZ9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV30A0A087WSZ9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 WHAMMP2-203ENST00000563942 1603 ntBASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV30A0A087WSZ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV30A0A087WSZ9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV30A0A087WSZ9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV30A0A087WSZ9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV30A0A087WSZ9 AC018358.1-201ENST00000631079 1402 ntBASIC19.68■□□□□ 0.74
TRAV30A0A087WSZ9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV30A0A087WSZ9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV30A0A087WSZ9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV30A0A087WSZ9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRAV30A0A087WSZ9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV30A0A087WSZ9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV30A0A087WSZ9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV30A0A087WSZ9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV30A0A087WSZ9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV30A0A087WSZ9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAV30A0A087WSZ9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRAV30A0A087WSZ9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV30A0A087WSZ9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV30A0A087WSZ9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.64■□□□□ 0.73
TRAV30A0A087WSZ9 AC044849.2-201ENST00000606596 710 ntBASIC19.64■□□□□ 0.73
TRAV30A0A087WSZ9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 AC087741.3-201ENST00000624270 1347 ntBASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV30A0A087WSZ9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV30A0A087WSZ9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRAV30A0A087WSZ9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV30A0A087WSZ9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV30A0A087WSZ9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV30A0A087WSZ9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV30A0A087WSZ9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV30A0A087WSZ9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV30A0A087WSZ9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms