Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 DRAXINP1-201ENST00000437611 948 ntBASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 HLA-A-201ENST00000376802 1334 ntBASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.51■■□□□ 1.19
ZNF408Q9H9D4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 KRT16P4-201ENST00000453883 522 ntBASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 AC104819.1-201ENST00000504587 486 ntBASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 AF228730.7-201ENST00000641842 219 ntBASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
ZNF408Q9H9D4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 TSPY12P-201ENST00000421279 868 ntBASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 BX640515.1-201ENST00000617215 977 ntBASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 AC117500.6-201ENST00000624871 588 ntBASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 AL157888.1-201ENST00000631930 593 ntBASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZNF408Q9H9D4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 RNF126P1-202ENST00000569893 925 ntBASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 AL136038.4-201ENST00000603606 1261 ntBASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 GPAT2P1-201ENST00000444924 1672 ntBASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF408Q9H9D4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 PMS2P1-201ENST00000431037 1228 ntBASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 AC074051.2-201ENST00000565115 352 ntBASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.47■■□□□ 1.19
ZNF408Q9H9D4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZNF408Q9H9D4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
ZNF408Q9H9D4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZNF408Q9H9D4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms