Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 AC060766.5-201ENST00000590539 871 ntBASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB40AQ8WXH6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 UNC93B5-201ENST00000530315 699 ntBASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 C2orf69P4-201ENST00000565394 541 ntBASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 Z98044.1-201ENST00000632503 1764 ntBASIC16.82■□□□□ 0.28
RAB40AQ8WXH6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 HLA-G-202ENST00000376815 851 ntBASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 HLA-G-203ENST00000376818 1127 ntBASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 ESRRAP1-201ENST00000400596 1257 ntBASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 AL031598.1-201ENST00000561511 1773 ntBASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 AC093525.10-201ENST00000625130 1569 ntBASIC16.81■□□□□ 0.28
RAB40AQ8WXH6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 KRT18P29-201ENST00000397031 1267 ntBASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 ITM2C-210ENST00000620962 501 ntBASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
RAB40AQ8WXH6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms