Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 AC245052.3-201ENST00000450182 901 ntBASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 BX119927.1-201ENST00000636596 1552 ntBASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXR1Q6PIV2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
FOXR1Q6PIV2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FOXR1Q6PIV2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FOXR1Q6PIV2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXR1Q6PIV2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 AC006333.2-201ENST00000607957 2099 ntBASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 AL139384.1-201ENST00000612143 3047 ntBASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 AC008550.1-201ENST00000511500 884 ntBASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 CYP2T3P-201ENST00000601990 817 ntBASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXR1Q6PIV2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 AC091799.1-201ENST00000422823 811 ntBASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 C1QBPP2-201ENST00000528754 825 ntBASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXR1Q6PIV2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms