Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.74■□□□□ 0.27
HIST1H3AP68431 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 TSPY23P-201ENST00000440136 739 ntBASIC16.74■□□□□ 0.27
HIST1H3AP68431 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HIST1H3AP68431 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
HIST1H3AP68431 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 HTR7P1-201ENST00000538670 1336 ntBASIC16.73■□□□□ 0.27
HIST1H3AP68431 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 AC006333.2-201ENST00000607957 2099 ntBASIC16.73■□□□□ 0.27
HIST1H3AP68431 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 FAM201B-201ENST00000458407 597 ntBASIC16.73■□□□□ 0.27
HIST1H3AP68431 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HIST1H3AP68431 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HIST1H3AP68431 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 CROCCP3-202ENST00000420820 1947 ntBASIC16.72■□□□□ 0.27
HIST1H3AP68431 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 AC004980.1-204ENST00000429707 299 ntBASIC16.72■□□□□ 0.27
HIST1H3AP68431 KSR1P1-201ENST00000446298 240 ntBASIC16.72■□□□□ 0.27
HIST1H3AP68431 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 RARRES2P10-201ENST00000564312 460 ntBASIC16.72■□□□□ 0.27
HIST1H3AP68431 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HIST1H3AP68431 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.72■□□□□ 0.27
HIST1H3AP68431 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.71■□□□□ 0.27
HIST1H3AP68431 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms