Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.51■□□□□ 0.39
CDC42P60953 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 AL133373.2-201ENST00000623187 2828 ntBASIC17.51■□□□□ 0.39
CDC42P60953 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42P60953 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.51■□□□□ 0.39
CDC42P60953 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.51■□□□□ 0.39
CDC42P60953 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDC42P60953 TFP1-202ENST00000475455 1573 ntBASIC17.51■□□□□ 0.39
CDC42P60953 AC069236.1-201ENST00000604339 616 ntBASIC17.51■□□□□ 0.39
CDC42P60953 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.51■□□□□ 0.39
CDC42P60953 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CDC42P60953 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDC42P60953 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.5■□□□□ 0.39
CDC42P60953 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.5■□□□□ 0.39
CDC42P60953 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDC42P60953 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42P60953 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.5■□□□□ 0.39
CDC42P60953 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.5■□□□□ 0.39
CDC42P60953 AC068338.2-201ENST00000563278 1430 ntBASIC17.5■□□□□ 0.39
CDC42P60953 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDC42P60953 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.5■□□□□ 0.39
CDC42P60953 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42P60953 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.5■□□□□ 0.39
CDC42P60953 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.5■□□□□ 0.39
CDC42P60953 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.5■□□□□ 0.39
CDC42P60953 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 PCDHB18P-201ENST00000524813 2368 ntBASIC17.5■□□□□ 0.39
CDC42P60953 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDC42P60953 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.49■□□□□ 0.39
CDC42P60953 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CDC42P60953 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.49■□□□□ 0.39
CDC42P60953 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 NOC2LP2-201ENST00000407594 1944 ntBASIC17.49■□□□□ 0.39
CDC42P60953 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.49■□□□□ 0.39
CDC42P60953 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.49■□□□□ 0.39
CDC42P60953 AL355472.2-201ENST00000422958 438 ntBASIC17.49■□□□□ 0.39
CDC42P60953 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.49■□□□□ 0.39
CDC42P60953 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.49■□□□□ 0.39
CDC42P60953 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.49■□□□□ 0.39
CDC42P60953 AC008694.1-202ENST00000636953 945 ntBASIC17.49■□□□□ 0.39
CDC42P60953 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDC42P60953 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CDC42P60953 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDC42P60953 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.49■□□□□ 0.39
CDC42P60953 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.48■□□□□ 0.39
CDC42P60953 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDC42P60953 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDC42P60953 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.48■□□□□ 0.39
CDC42P60953 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDC42P60953 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDC42P60953 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms