Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
HCN1O60741 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HCN1O60741 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HCN1O60741 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCN1O60741 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCN1O60741 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
HCN1O60741 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCN1O60741 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HCN1O60741 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.89■□□□□ 0.45
HCN1O60741 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.89■□□□□ 0.45
HCN1O60741 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.89■□□□□ 0.45
HCN1O60741 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.89■□□□□ 0.45
HCN1O60741 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.89■□□□□ 0.45
HCN1O60741 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.89■□□□□ 0.45
HCN1O60741 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.89■□□□□ 0.45
HCN1O60741 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.89■□□□□ 0.45
HCN1O60741 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.89■□□□□ 0.45
HCN1O60741 PHGDH-210ENST00000641115 1638 ntBASIC17.89■□□□□ 0.45
HCN1O60741 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.89■□□□□ 0.45
HCN1O60741 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.89■□□□□ 0.45
HCN1O60741 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HCN1O60741 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HCN1O60741 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HCN1O60741 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.88■□□□□ 0.45
HCN1O60741 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HCN1O60741 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.88■□□□□ 0.45
HCN1O60741 AF186192.3-201ENST00000583427 947 ntBASIC17.88■□□□□ 0.45
HCN1O60741 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HCN1O60741 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HCN1O60741 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.88■□□□□ 0.45
HCN1O60741 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HCN1O60741 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HCN1O60741 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.87■□□□□ 0.45
HCN1O60741 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HCN1O60741 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HCN1O60741 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.87■□□□□ 0.45
HCN1O60741 Z82202.1-201ENST00000623446 1880 ntBASIC17.87■□□□□ 0.45
HCN1O60741 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 TSPY7P-201ENST00000431358 1114 ntBASIC17.87■□□□□ 0.45
HCN1O60741 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.87■□□□□ 0.45
HCN1O60741 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.87■□□□□ 0.45
HCN1O60741 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.87■□□□□ 0.45
HCN1O60741 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HCN1O60741 AC073912.3-201ENST00000624414 853 ntBASIC17.87■□□□□ 0.45
HCN1O60741 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.87■□□□□ 0.45
HCN1O60741 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HCN1O60741 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
HCN1O60741 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HCN1O60741 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HCN1O60741 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HCN1O60741 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms