Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DCXO43602 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.22■□□□□ 0.83
DCXO43602 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 AC092119.3-201ENST00000612618 583 ntBASIC20.22■□□□□ 0.83
DCXO43602 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.22■□□□□ 0.83
DCXO43602 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
DCXO43602 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DCXO43602 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
DCXO43602 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DCXO43602 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
DCXO43602 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DCXO43602 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.21■□□□□ 0.83
DCXO43602 AC007225.1-201ENST00000566331 1836 ntBASIC20.21■□□□□ 0.83
DCXO43602 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DCXO43602 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DCXO43602 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
DCXO43602 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DCXO43602 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DCXO43602 AC004951.3-201ENST00000418645 1148 ntBASIC20.21■□□□□ 0.83
DCXO43602 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DCXO43602 AL023803.3-201ENST00000615559 522 ntBASIC20.21■□□□□ 0.83
DCXO43602 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DCXO43602 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DCXO43602 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
DCXO43602 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DCXO43602 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
DCXO43602 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
DCXO43602 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DCXO43602 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DCXO43602 KRT8P36-201ENST00000489121 1440 ntBASIC20.2■□□□□ 0.82
DCXO43602 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.2■□□□□ 0.82
DCXO43602 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DCXO43602 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
DCXO43602 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DCXO43602 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.2■□□□□ 0.82
DCXO43602 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.2■□□□□ 0.82
DCXO43602 AC112907.2-201ENST00000448639 330 ntBASIC20.2■□□□□ 0.82
DCXO43602 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.2■□□□□ 0.82
DCXO43602 AC008040.2-201ENST00000461049 708 ntBASIC20.2■□□□□ 0.82
DCXO43602 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.2■□□□□ 0.82
DCXO43602 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.2■□□□□ 0.82
DCXO43602 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.2■□□□□ 0.82
DCXO43602 NPAP1P7-201ENST00000613027 823 ntBASIC20.2■□□□□ 0.82
DCXO43602 AC083849.1-201ENST00000615227 514 ntBASIC20.2■□□□□ 0.82
DCXO43602 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DCXO43602 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DCXO43602 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
DCXO43602 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.19■□□□□ 0.82
DCXO43602 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.19■□□□□ 0.82
DCXO43602 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.19■□□□□ 0.82
DCXO43602 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.19■□□□□ 0.82
DCXO43602 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.19■□□□□ 0.82
DCXO43602 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.19■□□□□ 0.82
DCXO43602 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DCXO43602 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.19■□□□□ 0.82
DCXO43602 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DCXO43602 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.18■□□□□ 0.82
DCXO43602 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.18■□□□□ 0.82
DCXO43602 AL353719.1-201ENST00000566847 864 ntBASIC20.18■□□□□ 0.82
DCXO43602 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
DCXO43602 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.18■□□□□ 0.82
DCXO43602 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.18■□□□□ 0.82
DCXO43602 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.18■□□□□ 0.82
DCXO43602 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.18■□□□□ 0.82
DCXO43602 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.18■□□□□ 0.82
DCXO43602 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.18■□□□□ 0.82
DCXO43602 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DCXO43602 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.17■□□□□ 0.82
DCXO43602 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms