Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 AC131212.4-201ENST00000623606 975 ntBASIC18.29■□□□□ 0.52
PCDH17O14917 CR392000.1-201ENST00000624770 1228 ntBASIC18.29■□□□□ 0.52
PCDH17O14917 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 AC009237.14-201ENST00000609975 1594 ntBASIC18.29■□□□□ 0.52
PCDH17O14917 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH17O14917 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH17O14917 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH17O14917 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 FSCN1P1-201ENST00000568912 1481 ntBASIC18.28■□□□□ 0.52
PCDH17O14917 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDH17O14917 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH17O14917 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 AL355075.4-201ENST00000554988 638 ntBASIC18.28■□□□□ 0.52
PCDH17O14917 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDH17O14917 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PCDH17O14917 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH17O14917 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDH17O14917 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH17O14917 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDH17O14917 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 KRT8P8-201ENST00000434750 1448 ntBASIC18.27■□□□□ 0.52
PCDH17O14917 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH17O14917 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.27■□□□□ 0.52
PCDH17O14917 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH17O14917 DGCR10-201ENST00000609839 495 ntBASIC18.27■□□□□ 0.52
PCDH17O14917 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH17O14917 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH17O14917 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH17O14917 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH17O14917 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDH17O14917 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDH17O14917 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH17O14917 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDH17O14917 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDH17O14917 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH17O14917 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDH17O14917 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDH17O14917 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDH17O14917 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH17O14917 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH17O14917 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH17O14917 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH17O14917 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH17O14917 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH17O14917 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDH17O14917 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH17O14917 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH17O14917 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH17O14917 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms