Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.81□□□□□ -0.36
TRBV20-1A0A075B6N2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 FP475955.4-201ENST00000623131 1990 ntBASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 AL512353.2-201ENST00000448759 1962 ntBASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.8□□□□□ -0.36
TRBV20-1A0A075B6N2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 GPX1-201ENST00000419349 1106 ntBASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 SLC25A6P5-201ENST00000435663 894 ntBASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 AC010141.3-201ENST00000456659 717 ntBASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 SNX5-217ENST00000606557 1087 ntBASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 MIR2861-201ENST00000636310 90 ntBASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV20-1A0A075B6N2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms