Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC4Q9Y696 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC4Q9Y696 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLIC4Q9Y696 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC4Q9Y696 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.89■■□□□ 1.1
CLIC4Q9Y696 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 ESRRAP1-201ENST00000400596 1257 ntBASIC21.89■■□□□ 1.09
CLIC4Q9Y696 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC4Q9Y696 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 AL160286.2-201ENST00000567150 934 ntBASIC21.88■■□□□ 1.09
CLIC4Q9Y696 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC4Q9Y696 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 KRASP1-201ENST00000407852 552 ntBASIC21.87■■□□□ 1.09
CLIC4Q9Y696 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLIC4Q9Y696 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms