Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 AP000997.3-201ENST00000623333 2250 ntBASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 TERF1P5-201ENST00000477545 1207 ntBASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 AC092118.2-201ENST00000613495 667 ntBASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCM2LQ9NUG4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 AC008694.1-202ENST00000636953 945 ntBASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 AC068880.1-201ENST00000507289 2297 ntBASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCM2LQ9NUG4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 AC006058.3-201ENST00000606217 1069 ntBASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 OR10C1-204ENST00000622521 1039 ntBASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 AL512353.2-201ENST00000448759 1962 ntBASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
CCM2LQ9NUG4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCM2LQ9NUG4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms