Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 PCDHB18P-201ENST00000524813 2368 ntBASIC15.56■□□□□ 0.08
RAB40CQ96S21 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 RARRES2P4-201ENST00000514074 484 ntBASIC15.56■□□□□ 0.08
RAB40CQ96S21 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB40CQ96S21 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAB40CQ96S21 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 AL133373.2-201ENST00000623187 2828 ntBASIC15.55■□□□□ 0.08
RAB40CQ96S21 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB40CQ96S21 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RAB40CQ96S21 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40CQ96S21 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40CQ96S21 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40CQ96S21 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40CQ96S21 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB40CQ96S21 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RAB40CQ96S21 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms