Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS1Q92902 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.47■□□□□ 0.39
HPS1Q92902 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS1Q92902 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.47■□□□□ 0.39
HPS1Q92902 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS1Q92902 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS1Q92902 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HPS1Q92902 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 LINC01465-201ENST00000408887 1940 ntBASIC17.47■□□□□ 0.39
HPS1Q92902 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS1Q92902 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS1Q92902 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS1Q92902 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HPS1Q92902 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 AC016405.3-201ENST00000607710 860 ntBASIC17.46■□□□□ 0.39
HPS1Q92902 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.46■□□□□ 0.39
HPS1Q92902 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.46■□□□□ 0.39
HPS1Q92902 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HPS1Q92902 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 HTR7P1-202ENST00000624664 4411 ntBASIC17.46■□□□□ 0.39
HPS1Q92902 AC009053.2-201ENST00000563701 2365 ntBASIC17.46■□□□□ 0.39
HPS1Q92902 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HPS1Q92902 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
HPS1Q92902 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS1Q92902 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.46■□□□□ 0.39
HPS1Q92902 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
HPS1Q92902 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
HPS1Q92902 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HPS1Q92902 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HPS1Q92902 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS1Q92902 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS1Q92902 AC091799.1-201ENST00000422823 811 ntBASIC17.45■□□□□ 0.38
HPS1Q92902 AC007322.3-201ENST00000426526 701 ntBASIC17.45■□□□□ 0.38
HPS1Q92902 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HPS1Q92902 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS1Q92902 AC116050.2-201ENST00000612102 1779 ntBASIC17.45■□□□□ 0.38
HPS1Q92902 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS1Q92902 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS1Q92902 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HPS1Q92902 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS1Q92902 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HPS1Q92902 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS1Q92902 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS1Q92902 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS1Q92902 AC093787.1-201ENST00000450396 207 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms