Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 OR10C1-204ENST00000622521 1039 ntBASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
LINC00242Q5T6M2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 NOC2LP1-202ENST00000452600 2235 ntBASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00242Q5T6M2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 BID-214ENST00000617586 542 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 PCDHB18P-201ENST00000524813 2368 ntBASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00242Q5T6M2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC00242Q5T6M2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms